| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1635 |
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| Symbol | |
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| ID | 7974703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1767662 |
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| End bp | 1769197 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792235 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis Family |
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| Protein accession | YP_002943552 |
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| Protein GI | 239814642 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGA TCTGGATAGT TGATGACGAC CAATCGATCC GCTTCGTGCT GGAGAAGGCC
CTTTTGCGCG AAGACCTGCC CACGCGCAGC TTCACCAACG CGCGCGAGGT GCTGGCCGCC
CTCGAACTCG CCGACGACGA CGAACAGCAG GGCCCCCAGG TCCTGGTGAG CGACATCCGC
ATGCCCGGCG GCTCCGGGCT CGATCTGCTC GACAAGATCA AGGCCAAGCA CCCGGGCCTG
CCCGTCATCA TCATGACGGC GTTTTCCGAC CTCGACAGCG CCGTTTCGGC GTTCCAGGGC
GGTGCCTTCG AATACCTGCC CAAGCCCTTC GACCTGCCGC GCGCCGTCGA GCTGATCCGC
CGCGCCGTCG ACGAAAGCCA GCGCGAGGAA GTGGCCGAGG AGCGCATGGT CGCCGCGCCC
GAAATGCTGG GCCAGGCGCC CGCCATGCAG GACGTGTTCC GCGCCATCGG CCGGCTCTCG
CAGAGCAACG TCACGGTGCT CATCACGGGC GAATCGGGCT CGGGCAAGGA ACTGGTGGCG
CGCGCGCTGC ACAAGCATTC GCCGCGTGCC AACGGCCCCT TCGTGGCCAT CAACACCGCG
GCCATCCCCA AGGACCTGCT CGAGAGCGAG CTTTTCGGCC ACGAGCGCGG TGCCTTCACC
GGCGCGCAGA CCATGCGGCG CGGCCGCTTC GAGCAGGCCG AGGGCGGCAC GCTCTTTCTC
GACGAGATCG GCGACATGCC CTTCGACCTG CAGACGCGCC TGTTGCGCGT GCTGAGCGAC
GGGCACTTCT ACCGCGTGGG CGGCCACAAC TCGGTCAAGG CCAACGTGCG CGTGATCGCG
GCCACGCACC AGGACCTCGA GCAGCGCGTG AAGCTCGGCG GCTTCCGCGA AGACCTGTTC
CACCGCCTCA ACGTGATCCG CCTGCGCCTG CCGGCGCTGC GCGAGCGCGG CGAAGACGTG
CCGGCGCTCA CGCGCCACTT CCTGCAGGTG AGCGCGCGCC AGCTCGGCGT CGAGCCCAAG
CGCATTTCCG ATGCGGCGCT GGCCAAGCTG GCGTCGTTCA GCTTTCCGGG CAACGTGCGC
CAGCTCGAGA ACATCTGCCA CTGGCTGACC GTGATGGCAC CGGCCCAGCT GATCGAGGCC
AAGGACCTGC CGCCCGAAGT CATGGCCGCG GCGGCCGGTG CGCCGGTGCA AGCCGCGGAA
GGCACGGCCG CCACCGCGGT GCCCGCGCAA GCCGCACCGC TGCCGTCGCC CGGGCTCGAG
CGCGAAGCGG CACCGGCGGC GGGCGGCGCT GCACCCGAGG CCACTGAAGG TTTGGTGGGC
GCAAGCAGCT GGGAGAGCGG CCTGGAGATC GAAGCCCAGG CGCTGCTCGC GGCCGGGCGC
ACCGACGTCT GGGATGTGCT GTCGCGCCGT TTCGAGTCGC GGCTGATCCT CACGGCGCTG
GCCAACACCC GCGGCCGACG GATCGAAGCC GCTCAGAAGC TGGGCATCGG CCGCAACACC
ATCACCCGCA AGATCCAGGA ACTCGGGATC GAGTAG
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| Protein sequence | MKPIWIVDDD QSIRFVLEKA LLREDLPTRS FTNAREVLAA LELADDDEQQ GPQVLVSDIR
MPGGSGLDLL DKIKAKHPGL PVIIMTAFSD LDSAVSAFQG GAFEYLPKPF DLPRAVELIR
RAVDESQREE VAEERMVAAP EMLGQAPAMQ DVFRAIGRLS QSNVTVLITG ESGSGKELVA
RALHKHSPRA NGPFVAINTA AIPKDLLESE LFGHERGAFT GAQTMRRGRF EQAEGGTLFL
DEIGDMPFDL QTRLLRVLSD GHFYRVGGHN SVKANVRVIA ATHQDLEQRV KLGGFREDLF
HRLNVIRLRL PALRERGEDV PALTRHFLQV SARQLGVEPK RISDAALAKL ASFSFPGNVR
QLENICHWLT VMAPAQLIEA KDLPPEVMAA AAGAPVQAAE GTAATAVPAQ AAPLPSPGLE
REAAPAAGGA APEATEGLVG ASSWESGLEI EAQALLAAGR TDVWDVLSRR FESRLILTAL
ANTRGRRIEA AQKLGIGRNT ITRKIQELGI E
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