| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1634 |
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| Symbol | |
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| ID | 7974702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1766559 |
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| End bp | 1767638 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792234 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_002943551 |
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| Protein GI | 239814641 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTCG GGAAGAAGGC GGCCGGCGCC ACTCCGCGCT TTCAGTCCTT CGACCTGCTG
TCCACGCTGA TCGCGGTGGT CAGCACCAAC GGTTCGGTGC TGTTTGCCAA TGCGGCCCTC
GAAGACGCGC TGGGCACCTC GCGCCGCACG CTCGAAGGCT CTCAGTTCGG TGCCTGCTTT
CACGAGCCGC ACGTGCTTCG CACCGCCATC GACGGTGCGC GCAGCAACGA CTTCGCCACG
CTGCGCTACG AGGCCTTCCT GCGCCGCGTC AATCATGAGC TGATGCCGGT GCAGGTCACG
CTGGCGCAGG GCGACAAGAC GGGCGAGCTC ATCATCGAGA TGTCGCCGCT CGAGCAGCAG
GTGCGCCAGG ACCGCGAGGA GCGCCTGCTC GACCAGGCGC AGGCCAACAA GGAGCTCATC
CGCAACCTTG CGCACGAGAT CAAGAACCCG CTCGGCGGCA TCCGCGGCGC GGCGCAATTG
CTGCAGATGG AGGTCGAATC GCGCGACCTC ATCGAATACA CGCAGGTCAT CATCCACGAG
GCCGACCGGC TGCAGACGCT GGTCGACCGG CTACTGGCAC CGCACCGGCG CCCGCACGTG
GTGGGCGACG TGAACATCCA CGAAGTCTGC GAGCGCGTGC GCTCGGTCAT TCTTGCGGAG
TTTCCGCGCG ACCTGCACAT CGAGCGCGAC TTCGACGTGT CGATTCCCGA ATTCCGCGGC
GACCGCGAGC AGCTCATCCA GGCCACGCTC AACATCGTGC ACAACGCGGC GCAGGCCCTG
GCCGAGCGCC GCGCCGCAGG CGATGCGCAG ATCACTTTCA AGACCCGCAT CGCCCGGCAG
GTGATATTCA ACAAGCAGTG GTATCGATTG GCACTGGAAT TGCATGTCAT CGACAATGGA
CCGGGTGTGC CGGACACGAT CAAGGACCGC ATCTTCTATC CGCTCGTCTC GGGCAGGGAG
GGCGGGACCG GGCTTGGATT GACGCTTGCA CAAACTTTCG TGCAACAGCA TCACGGCGTG
ATCGAGTGCG ACAGCGTCCC GGGCCGAACC GATTTCAAGA TATTGATTCC GCTGCCCTAG
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| Protein sequence | MAFGKKAAGA TPRFQSFDLL STLIAVVSTN GSVLFANAAL EDALGTSRRT LEGSQFGACF
HEPHVLRTAI DGARSNDFAT LRYEAFLRRV NHELMPVQVT LAQGDKTGEL IIEMSPLEQQ
VRQDREERLL DQAQANKELI RNLAHEIKNP LGGIRGAAQL LQMEVESRDL IEYTQVIIHE
ADRLQTLVDR LLAPHRRPHV VGDVNIHEVC ERVRSVILAE FPRDLHIERD FDVSIPEFRG
DREQLIQATL NIVHNAAQAL AERRAAGDAQ ITFKTRIARQ VIFNKQWYRL ALELHVIDNG
PGVPDTIKDR IFYPLVSGRE GGTGLGLTLA QTFVQQHHGV IECDSVPGRT DFKILIPLP
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