| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1620 |
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| Symbol | |
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| ID | 7974849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1749918 |
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| End bp | 1752563 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792220 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_002943537 |
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| Protein GI | 239814627 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCCT TCGCCAAAGA AACCCTGCCC ATCAGTCTCG AAGAGGAAAT GCGCAGCAGC
TATCTCGATT ACGCCATGAG CGTGATCGTG GGCCGGGCGC TTCCCGATGC GCGCGACGGC
CTCAAGCCCG TGCACCGGCG CGTGCTGTAT GCCATGCACG AGCTCAACAA CGACTGGAAC
CGGGCGTACA AGAAGTCCGC CCGCATCGTG GGCGACGTGA TCGGCAAGTA CCACCCGCAC
GGCGACCAGT CGGTCTACGA CACCATCGTG CGGCTGGCGC AGGACTTTTC CATGCGCCAT
ATGCTGGTCG ACGGCCAGGG CAACTTCGGG TCGGTCGACG GCGACAACGC GGCTGCAATG
CGGTATACGG AAATCCGCCT CGCCAAAATT GCGCACGAAA TGCTGGCCGA TATCGACAAG
GAAACTGTCG ATTTCCAGGA CAATTACGAC GGCTCCGAAA AAGAACCAAA GGTCCTTCCG
AGCAAACTGC CGAATTTGCT GGTGAATGGT TCCGGCGGTA TTGCGGTGGG CATGGCCACC
AATATTCCGC CGCACAATCT CAATGAGGTG GTGGACGCCT GCCTGCATCT GCTGCGCAAT
CCGCAGGCCA CCATCGACGA GCTGATGGAA ATCGTGCCGG CGCCGGACTT CCCCACCGCC
GGCATCATCT ACGGCATCAA TGGCGTGCGC GACGGCTACC GCACCGGCCG CGGCAAGGTC
GTGATGCGCG CCAAGTGCCA CTTCGAGGAC ATCGACCGCG GCCAGCGCCA GGCGATCATC
GTCGACGAGC TCCCCTACCA GGTCAACAAG AAGACGCTGC AGGAGCGCAT GGCCGAGCTG
GTGCACGAGA AGAAGATCGA AGGCATCAGC CACATCCAGG ACGAGTCCGA CAAGTCGGGC
ATGCGCCTGG TGATCGAGCT CAAGCGCGGC GAAGTGCCCG AGGTGGTGCT CAACAACCTG
TACAAGCAGA CCCAGCTGCA GGACACCTTC GGCATCAACA TGGTGGCGCT GGTCGACGGC
CAGCCCAAGC TGTGCAACCT GAAGGACCTG ATCGAGGTCT TCCTGCAGCA CCGCCGCGAA
GTGGTCACGC GCCGCACCGT CTTCACGCTG CGCAAGGCGC GCGAACGCGG CCACGTGCTC
GAAGGCCTGG CGGTGGCCCT GGCCAACATC GACGAATTCA TCCGCATCAT CCGCGAGTCG
CCTACCCCGC CGGTTGCCAA GGCCGAGCTC ATGACCCGCA GCTGGGACAG CAAGCTGGTG
CGCGAGATGC TGACGCGCTC GCGCGCAGAC GGCGGCGTGG TCAATGCCGA CGACTACCGC
CCCGAGGGCC TGGAGCGCGA GTTCGGCATG GGCTCGGACG GCCTCTACCG CCTGTCGGAA
ACCCAGGCCC AGGAAATCCT GCAGATGCGC CTGCAGCGCC TGACCGGCCT CGAGCAGGAC
AAGATCGTTG CCGAGTACAA GGAGGTCATG GCCGAGATCG ACGACCTGCT CGACATCCTG
GCCAAGCCGG AGCGCGTCTC GGTCATCATT GGCGAGGAAC TCGGCACCAT CAAGCAGGAG
TTCGGCCAGT CCAAGCTCGG CGCGCGCCGC AGCCTGGTGG AGCACAGCGC CTACGACCTC
TCGACCGAAG ACCTGATCAC GCCCACCGAC ATGGTGGTGA CGCTTTCGCA CAGCGGCTAC
ATCAAGAGCC AGCCGCTGAA CGAATACCGC GCGCAAAAGC GCGGCGGGCG CGGCAAGCAG
GCCACCGTCA CCAAGGAAGA CGACTGGATC GACCAGCTCT TCATCGCCAA CACGCACGAC
TACATCCTGT GCTTCTCCAA CCGCGGCCGG CTGTACTGGC TCAAGGTGTG GGAAGTGCCG
GCGGGTTCGC GCGGCTCGCG CGGGCGCCCC ATCGTCAACA TGTTCCCGCT GCAGGAAGGC
GAGAAGATCA ACGTGGCGCT CGCGCTGACC GGCGAGAAGC GCAACTTCCC GGCCGACCAG
TACGTGTTCA TGGCCACCTC CATGGGCACG GTCAAGAAGA CCACGCTCGA CGAATTCAGC
AACCCGCGCA AGGGCGGCAT CATTGCCGTG AACCTCGACG AGGGCGACTA CCTCATCGGC
GCCGCCCTGA CCGACGGCAA GCACGACGTG ATGCTGTTCA GCGACGGCGG CAAGGCCGTG
CGCTTCGACG AGGAAGACGT GCGCCCGCTC GGCCGCAATG CACGCGGCGT GCGCGGCATG
TCGCTCGATC CGGGACAGGG CGTGATCGCC ATGCTGGTGG CCGAGGACGA GCAGCAAAGC
GTGCTCACCG CCACCGAAAA TGGTTACGGA AAGCGCACAA GCATTACCGA GTACACGCGT
CATGGCCGCG GAACCAAAGG CATGATTGCG ATTCAACAGA GTGAGCGCAA CGGCAAGGTC
GTTGCCGCCA CCCTCGTGCA TGCGGACGAT GAGATCATGC TCATCACCGA CAAGGGCGTG
CTCGTGCGCA CCCGGGTAGC CGAGATTCGT GAACTGGGTC GCGCAACGCA AGGCGTTACG
CTGATCGGGC TCGACGAAGG CGCCAAACTC AGCGGGCTAC AACGTATCGT CGAAAACGAC
GCCAACGGCG AGAGTGAGCC TGGCGCAGAC GATACTTCCT CATCTTCAAC GGAGAATCCT
CAGTGA
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| Protein sequence | MTSFAKETLP ISLEEEMRSS YLDYAMSVIV GRALPDARDG LKPVHRRVLY AMHELNNDWN
RAYKKSARIV GDVIGKYHPH GDQSVYDTIV RLAQDFSMRH MLVDGQGNFG SVDGDNAAAM
RYTEIRLAKI AHEMLADIDK ETVDFQDNYD GSEKEPKVLP SKLPNLLVNG SGGIAVGMAT
NIPPHNLNEV VDACLHLLRN PQATIDELME IVPAPDFPTA GIIYGINGVR DGYRTGRGKV
VMRAKCHFED IDRGQRQAII VDELPYQVNK KTLQERMAEL VHEKKIEGIS HIQDESDKSG
MRLVIELKRG EVPEVVLNNL YKQTQLQDTF GINMVALVDG QPKLCNLKDL IEVFLQHRRE
VVTRRTVFTL RKARERGHVL EGLAVALANI DEFIRIIRES PTPPVAKAEL MTRSWDSKLV
REMLTRSRAD GGVVNADDYR PEGLEREFGM GSDGLYRLSE TQAQEILQMR LQRLTGLEQD
KIVAEYKEVM AEIDDLLDIL AKPERVSVII GEELGTIKQE FGQSKLGARR SLVEHSAYDL
STEDLITPTD MVVTLSHSGY IKSQPLNEYR AQKRGGRGKQ ATVTKEDDWI DQLFIANTHD
YILCFSNRGR LYWLKVWEVP AGSRGSRGRP IVNMFPLQEG EKINVALALT GEKRNFPADQ
YVFMATSMGT VKKTTLDEFS NPRKGGIIAV NLDEGDYLIG AALTDGKHDV MLFSDGGKAV
RFDEEDVRPL GRNARGVRGM SLDPGQGVIA MLVAEDEQQS VLTATENGYG KRTSITEYTR
HGRGTKGMIA IQQSERNGKV VAATLVHADD EIMLITDKGV LVRTRVAEIR ELGRATQGVT
LIGLDEGAKL SGLQRIVEND ANGESEPGAD DTSSSSTENP Q
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