| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1618 |
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| Symbol | |
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| ID | 7974847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1748196 |
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| End bp | 1749329 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792218 |
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| Product | phosphoserine aminotransferase |
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| Protein accession | YP_002943535 |
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| Protein GI | 239814625 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1932] Phosphoserine aminotransferase |
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| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCAGC AGCAGCACCA GCCGGCCGGC ACGCGCCCGT ACAACTTTTC CGCCGGCCCG
GCCGCCATGC CGGAGGCGGT GCTGCAACGC GCCGCCGCCG AAATGCTCGA CTGGCAGGGC
AGCGGAATGA GCGTGATGGA AATGAGCCAT CGCGGCAAGG AATTCGGCGC GATCTGCACC
CAGGCCGAAG CCGACATCCG CACGCTGCTG GCCGTGCCGG AGCACTTCCA CATCCTCTTC
ATGCAGGGTG GCGGCCTCGG CGAGAACGCC ATCGTGCCGA TGAACCTGTC GCGCGGCACC
GCCGCCGACT TCGTCATCAC CGGCAGCTGG AGCATCAAGT CGCAGAAGGA AGCGCAGCGC
TACTGCACGG CGAACATCGC CGCGAGCAAC GCCGGCGACC ATCACACGCG GCTGCCCGAC
CCTTCGACCT GGCAGCTCAG CAAGAACGCC TCGTACGTGC ACCTGTGCAC CAACGAAACC
ATCAACGGCA TCGAGTTCCA GCAGCTACCC GACCTCGCGG CCCTTGGCAG CGATGCGCCG
CTGGTCATCG ACTTTTCGTC GCACGTGGCC TCGCGCAGCG TCGACTGGCG CCGTGTCGGC
CTTGCCTTCG GCGGCGCCCA GAAGAACCTC GGACCGGCCG GGCTCACCCT GGTGATCGTG
CGCGACGACC TGCTCGGGCA TGCACTCGAG ATCTGCCCGA GCGCGTTCAA CTACAAGATC
GTGGCCGACA ACAAGTCCAT GTACAACACC CCGCCGACCT GGGGCATCTA CATGGCGGGG
CTGACGTTCC AGTGGCTGCT GCAGCAGACC GAAGGCACGC TCACCGGGGT GGCCGCCATG
GAGCAGCGCA ACATCGCCAA GGCCAGGCTG CTGTACGACT TCATCGACGC CTCCCCGTTC
TACGTCAACA AGATCGACCC GGGTTGCCGT TCGCGCATGA ACGTGCCGTT CTTCCTGGCG
GACGAGAGCC GCAACGACGC CTTCCTGGCC GGTGCGCGCG AGGCCGGCCT GCTGCAGCTC
AAGGGCCACA AGTCGGTCGG CGGGATGCGC GCGAGCATCT ACAACGCCAT GCCGCTGGAA
GGCGTACAGG CACTTGTGAG CTACATGCGA GAATTCGAGC GATCGCATGC CTAG
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| Protein sequence | MTQQQHQPAG TRPYNFSAGP AAMPEAVLQR AAAEMLDWQG SGMSVMEMSH RGKEFGAICT
QAEADIRTLL AVPEHFHILF MQGGGLGENA IVPMNLSRGT AADFVITGSW SIKSQKEAQR
YCTANIAASN AGDHHTRLPD PSTWQLSKNA SYVHLCTNET INGIEFQQLP DLAALGSDAP
LVIDFSSHVA SRSVDWRRVG LAFGGAQKNL GPAGLTLVIV RDDLLGHALE ICPSAFNYKI
VADNKSMYNT PPTWGIYMAG LTFQWLLQQT EGTLTGVAAM EQRNIAKARL LYDFIDASPF
YVNKIDPGCR SRMNVPFFLA DESRNDAFLA GAREAGLLQL KGHKSVGGMR ASIYNAMPLE
GVQALVSYMR EFERSHA
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