| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1608 |
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| Symbol | |
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| ID | 7974837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1738080 |
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| End bp | 1738589 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792208 |
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| Product | Tripartite ATP-independent periplasmic transporter DctQ component |
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| Protein accession | YP_002943525 |
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| Protein GI | 239814615 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAAGA CGCTCGATTT CCTCTACAAC AGCGCCGCCG CCCTGGCGGC GCTTTTCATG
ATCGGCCTGC TGGTGATGGT GCTGCTGTCC ATCGTCGGGC GGCAGCTTCA TTTCAACATT
CCGGGCATCG ATGCCTATGC CGGCTACCTG ATGGCCGGCG CCGGCTTCCT GGCGCTCGCC
CACACGCTCA AGCGCGGCGA GCACATCCGC GTGACGCTGG TGCTGCAGAA CCTGCCGCCG
GCCGCGCAGC GCTGGCTGGA GCGCTGGGCG ATGGGTGCGG GCGCCCTGCT CGCGGTGCTG
TTTGCCTGGT ACAGCGCGCG GCTGGCGTTC CAGTCGTACG ACTTCCACGA CATTTCCACC
GGCAACGACG CCACGCCCCT GTGGCTGCCG CAGCTCTCGA TGGCCGTGGG TGCGCTGGTG
TTCGCCATCG CAGCCTTCGA CGAGTTCGTG ATCGAGTGGC GCGGAAGGCC GGCCAAGCCG
GCCGGGACGG AGGCCCTGCG CCATGAGTGA
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| Protein sequence | MRKTLDFLYN SAAALAALFM IGLLVMVLLS IVGRQLHFNI PGIDAYAGYL MAGAGFLALA
HTLKRGEHIR VTLVLQNLPP AAQRWLERWA MGAGALLAVL FAWYSARLAF QSYDFHDIST
GNDATPLWLP QLSMAVGALV FAIAAFDEFV IEWRGRPAKP AGTEALRHE
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