| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1602 |
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| Symbol | |
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| ID | 7974831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1730794 |
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| End bp | 1731285 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792202 |
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| Product | putative monovalent cation/H+ antiporter subunit E |
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| Protein accession | YP_002943519 |
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| Protein GI | 239814609 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCT GGCTTCCTTC GCCGCCGCTC TCGCTGGCGC TGTTTGCGGT GTGGCTGCTG
CTCAACCAGT CGCTCGACGC CGCCACGCTG CTGTCGGCCG CGCTGCTGGC CATGGCGGTT
CCGCTGCTCA CCAAGGGCCT GCGGCCCGCC ACCGTGCGCA TGCGCAAGCC CTGGGTGGCG
CTGCGGCTCG CGGGCCGGGC CGTGGCCGAC ATGCTGGAAT CGGCGCTCTT CGTGGCGCGG
CGGCTGCTGA CGCGCCGCAA CTCGCGCATC GCCTCGCGGT TCATCAACGT GCCGCTGGAC
CTGCGCGACC CGAACGGGCT CGCGGTGCTG GCCATGATCA TGTGCCTCAC GCCCGGCACG
GCCTGGGGCG AGATCGCGTT CGACAGCAGC ACGCTGCTGA TCCATGTGTT CGACGTCGAC
GACGAAGCCG CTTTCATCGC CATGATCAAG CAGCGCTACG AGCACCCCCT GATGGAGATT
TTCGAATCAT GA
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| Protein sequence | MKRWLPSPPL SLALFAVWLL LNQSLDAATL LSAALLAMAV PLLTKGLRPA TVRMRKPWVA
LRLAGRAVAD MLESALFVAR RLLTRRNSRI ASRFINVPLD LRDPNGLAVL AMIMCLTPGT
AWGEIAFDSS TLLIHVFDVD DEAAFIAMIK QRYEHPLMEI FES
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