| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1599 |
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| Symbol | |
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| ID | 7974828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1729128 |
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| End bp | 1730150 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792199 |
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| Product | protein of unknown function DUF182 |
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| Protein accession | YP_002943516 |
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| Protein GI | 239814606 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATC TCGACGTCAT GGTGCTGCGC ACGCTGCGCG ACTGGCGGCG CGCCGGCAAG
CGCGCGCTGC TCACGACCGT GGTGCGCACC TGGGGCTCGT CGCCGCGGCC GGTCGGTTCG
ATCATGGCGC TGGCCGACGA TGGCGCGGTG GTGGGCTCGG TCTCCGGCGG CTGCATCGAG
GACGACCTGA TCGCGCGCTA CAGCCATGCG CACGGCAACG GCGAACAGGT GCCCGTGGGC
GCGCCGCCCG TGCTCGTGAA GTACGGCATC ACGGCCGACG AGGCGCACCG CTTCGGCCTG
CCCTGCGGCG GCACGCTGGA GCTGCTGCTC GAATACGACC CCGACGCGGC CTTGCTCGAC
ACGCTCGTGG CCCAGCTGGA GCAAGGCCGG CTCATGCAGC GCACCGTCAC GCTTTCGACC
GGTGCCGTGC GCCTGGCCGA AGCCACCGCG CCCGATGCGC TCAAGGTGAA CGACACCGAG
CTCACCAACA CCTTCGGCCC CGAATACCGC ATGCTGCTGA TCGGCGCCGG CCAGCTGGCC
GAATACCTCG CGACCATGGC CAAGTTCAGC GGCTTTGCCG TGACGCTGTG CGACCCGCGT
GCCGAATACC GCACCGCATG GACGCTCGCC GGCGTGGAGA TCACGACCGA GATGCCCGAC
GACGCGGTGC TGGCCTTCAA GCCCGACCGC CGCAGCTGCG TGGTGGCGCT CACGCACGAC
CCCAAGCTCG ACGACCTTGC GCTGCTCGAA GCACTGCAGA GCGAGGCCTT CTACGTCGGC
GCGATCGGCT CGCGCCGCAA TGCCGAGGCG CGGCGCGGCC GCATGATCGA GCACTTCGGC
CAGACAGAGG AATCGCTCGC ACGACTGCGC GGACCCATCG GCATCTACAT CGGCAGCAAG
ACGCCGCCCG AGATCGCCGT GAGCGTGATG GCCGAGATCC TGGCCGTGAA GAACGCGGTG
ACGCTGCCGC GCGAAATGGA AGTGGCGCGC GCCAAGGGCA TGCAGCAGCT CGCGATGAGC
TGA
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| Protein sequence | MENLDVMVLR TLRDWRRAGK RALLTTVVRT WGSSPRPVGS IMALADDGAV VGSVSGGCIE
DDLIARYSHA HGNGEQVPVG APPVLVKYGI TADEAHRFGL PCGGTLELLL EYDPDAALLD
TLVAQLEQGR LMQRTVTLST GAVRLAEATA PDALKVNDTE LTNTFGPEYR MLLIGAGQLA
EYLATMAKFS GFAVTLCDPR AEYRTAWTLA GVEITTEMPD DAVLAFKPDR RSCVVALTHD
PKLDDLALLE ALQSEAFYVG AIGSRRNAEA RRGRMIEHFG QTEESLARLR GPIGIYIGSK
TPPEIAVSVM AEILAVKNAV TLPREMEVAR AKGMQQLAMS
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