Gene Vapar_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1598 
Symbol 
ID7974827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1728499 
End bp1729113 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content69% 
IMG OID644792198 
Productcarbon monoxide dehydrogenase subunit G 
Protein accessionYP_002943515 
Protein GI239814605 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGC TCGGCAACCG CCGCCTCGGC GTCACCCAAC AACAGGCCTG GGAAGCGCTC 
AACGATCCCG AGACGCTCAA GAAGTGCATT CCCGGCTGCG ACAAGTTCGA GCTCACGGGC 
GACAACCAGT ACAGCGTGGC GCTGGCGGTC AAGATCGGTC CGGTGTCGGC CAAGTTCAGC 
GGCAAGGTCG CGCTGTCCGA CATCGTGGCG CCCGATGGCT ACAAGCTCAG CTTCGAGGGG 
CAGGGCGGCG TGGCGGGCTT TGCCAAGGGT TCGTCCAGCG TGACGCTGCG GCCGCTGGAC 
GGCGCCGCCG AAGCCGCGCC GGCCGCGGCC GGCTGCGAGC TCGACTACAC CGTGCAGGCG 
CAGGTCGGCG GCAAGATCGC CCAGCTGGGC CAGCGCCTCA TCGATGGCGC CGCCAAGTCG 
ACCGCCGACG ACTTCTTCAA GCGCTTCGAG GCCGAGATGC AGAGCCGCTA CGGCCCGCCG 
CCGGCCGCCG CGGCCGAGGA CACGGCCGAG GCGCCCGCCG AAAAGGCCGG CATGATGTCC 
GGCCTCATGA AGAAGATCGG CCTCGGCAAG AAGGACGACA AGGACGCGTC CGTCGCACCG 
GGCGACGCCA GCTAG
 
Protein sequence
MEMLGNRRLG VTQQQAWEAL NDPETLKKCI PGCDKFELTG DNQYSVALAV KIGPVSAKFS 
GKVALSDIVA PDGYKLSFEG QGGVAGFAKG SSSVTLRPLD GAAEAAPAAA GCELDYTVQA 
QVGGKIAQLG QRLIDGAAKS TADDFFKRFE AEMQSRYGPP PAAAAEDTAE APAEKAGMMS 
GLMKKIGLGK KDDKDASVAP GDAS