| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1589 |
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| Symbol | |
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| ID | 7974818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1719062 |
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| End bp | 1719781 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644792189 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943506 |
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| Protein GI | 239814596 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGAAC ACGCGCAGCT CGCGAGCGCG GATGCCACCG TCTTTGCGCT CTACGGCGTC
GACGTGCGCC TGGGGCGGGT GGCGGCGCTG CACGGCGCAA CCCTGACCAT CGCGGCCGGC
GAGCGCGTGG CGCTCATCGG CGCCAACGGC AGCGGCAAGA CCACGCTGCT GCGGCTGCTG
CACGGCCTGG TGCCGCATGC GGCGGGGAGC TTCACCAGCG CCGCGCCGCG CCGGCAGCAG
GCCATGCTGT TCCAGCGCCC GCACATGCTG CGCGCCTCGG TGACGGTCAA TGTGGCCCTG
GCGCTGTGGC TGCGCGGCAT GCGCTGGCGC GATGCCCGCC GCGCCGCCAT TCCGGCGCTG
GCGCGCGTGG GCCTGGAAGA CCTGGCCGAG CGCAACGCGC GTGCGCTGTC GGGCGGCCAG
CAGCAGCGGG TGGCGCTGGC GCGCGCCTGG GCGCTGCATC CGGCGGTGCT GCTGCTCGAC
GAGCCCACGG CCAGCCTCGA CCCCACTGCC AAGCGCGAGG TCGAGACGCT CATCGCCGAA
GCCGCCGCCG GCCGCACGCT GGTGTTCGCG AGCCACAACC TCGGGCAGGT GAAGCGGCTC
GCGAGCCGCG TGGTCTATCT CGAGCACGGC CGCGTGCTGG CCGACCTGCC GGTCCACGAT
TTCTTCCATG GGCCCCTGCC GGAGGAGGCC CGCCTGTTCG TCAAAGGAGA GTTGGCATGA
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| Protein sequence | MNEHAQLASA DATVFALYGV DVRLGRVAAL HGATLTIAAG ERVALIGANG SGKTTLLRLL
HGLVPHAAGS FTSAAPRRQQ AMLFQRPHML RASVTVNVAL ALWLRGMRWR DARRAAIPAL
ARVGLEDLAE RNARALSGGQ QQRVALARAW ALHPAVLLLD EPTASLDPTA KREVETLIAE
AAAGRTLVFA SHNLGQVKRL ASRVVYLEHG RVLADLPVHD FFHGPLPEEA RLFVKGELA
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