| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1585 |
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| Symbol | |
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| ID | 7974814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1714741 |
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| End bp | 1715454 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792185 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943502 |
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| Protein GI | 239814592 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.230089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG CGAACATCCT CGAAGTCGAG GCGCTGCATG CCCACTACGG CAAGAGCCAC
GTGCTGCAGG GCGTGTCGAT GACGGTCGGC GAGGCCGAAC TGGTCACGCT GCTGGGCCGC
AACGGCGCAG GCAAGTCGAC CACGCTCAAG GGCATTGCCG GTGCGGTCAC GCCCACCGGC
GGCCGCGTGC GCTTCCGGGG CGCGGACATC GCGGGCCTGC CGCCGCATCG CATTGCTACG
CGCGGCGTGT GCCTGGTGCC CGAGCACCGC GGGGTCTTCA AGCTGCTCAC GGTGGAAGAA
AACCTGCTGC TCGGCCAGCG CCGCGATTCG CCCTGGCAGC TGGACGACAT CTACCGCATC
TTCCCGCGCC TGAAGGAGCG GCGCCGCAAT GGCGGCGGCC AGCTCTCGGG CGGCGAGCAG
CAGATGCTGG CCATCGGCCG CGCGCTCATG AACCACCCGC GGCTGTTGAT CCTCGACGAG
CCGGTCGAAG GCCTCGCGCC GGTGATCGTG GAAGAAATCG TCGCGCAGCT CAAGCTCATC
AAGGCGGCCG GCGTGGCCAT CCTGCTGGTC GAGCAGAACC TGGAAGTCTG CGTGCAGCTG
GCGGACCGCC ACTACATCCT GGAGCAAGGC GTGATCGTGC ACGAGGCGGG CAACGCCGCC
TTCATGGCCG ACCACGATGT GAAAGACCGA TATTTGGGCG TGGGCCTTGC TTGA
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| Protein sequence | MSAANILEVE ALHAHYGKSH VLQGVSMTVG EAELVTLLGR NGAGKSTTLK GIAGAVTPTG
GRVRFRGADI AGLPPHRIAT RGVCLVPEHR GVFKLLTVEE NLLLGQRRDS PWQLDDIYRI
FPRLKERRRN GGGQLSGGEQ QMLAIGRALM NHPRLLILDE PVEGLAPVIV EEIVAQLKLI
KAAGVAILLV EQNLEVCVQL ADRHYILEQG VIVHEAGNAA FMADHDVKDR YLGVGLA
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