| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1584 |
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| Symbol | |
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| ID | 7974813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1713977 |
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| End bp | 1714744 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792184 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943501 |
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| Protein GI | 239814591 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.391737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA TCCTCATCGA AGCCATTGGC GTCACCAAGC ACTACGGCAA GTTCGCCGCG
CTCGGCGGGG TCGACCTGAA GATCAAGCGC AACACCGTGC ACTCGGTGAT CGGTCCGAAC
GGCGCCGGCA AGACCACGCT GTTCCACATG CTCACGGGCA CCGGCACCAC CACGGGTGGC
CGCATCCTGT TCGACGGCCA CGACGTGACG CACGAGCCCG ACCACAAGCG CGTGCAGCGC
GGCATGGCAC GCTCGTTCCA GGTGACCAGC CTGTTCGCGA GCCTTTCGGT GCGCGAGAAC
CTGCGCGTGG CGGCGCAGGG CATCGCGCCG CGCCAGGCCA TGAACTGCTG GCGCGCGCCG
GTCGGCGAAC GCGCCTGCGC CGAGACGGTG GCCGAGGTGC TGGAACGCGT GGGCCTGCAG
CGGCTGGCCG ACGTGCCCGC GAGCGAGCTG TCGCATGGCC AGCAGCGCCG CCTCGAAGTG
GGCATGGCGC TGGCCGCCAA GCCCAAGGCC ATCTTCCTGG ACGAGCCCAC CTCGGGCATG
GGCATCGACG ACCTCGACGA CATGAAGCGG CTGATCCGCG GCCTGCGCGA CGCCCACACC
GTGGTGCTGA TCGAGCACAA CATGAACATC GTGATGGACA TCTCCGACAC CGTGACCGTG
ATGCAGCTGG GCCGCGTGCT GGCCGAGGGG CTGCCGGGCG ACATCCGGGC CGATGCGCGC
GTGCGCACGG CCTACCTGGG CAACATGATC ACGGGGGGCA AGGTATGA
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| Protein sequence | MSDILIEAIG VTKHYGKFAA LGGVDLKIKR NTVHSVIGPN GAGKTTLFHM LTGTGTTTGG
RILFDGHDVT HEPDHKRVQR GMARSFQVTS LFASLSVREN LRVAAQGIAP RQAMNCWRAP
VGERACAETV AEVLERVGLQ RLADVPASEL SHGQQRRLEV GMALAAKPKA IFLDEPTSGM
GIDDLDDMKR LIRGLRDAHT VVLIEHNMNI VMDISDTVTV MQLGRVLAEG LPGDIRADAR
VRTAYLGNMI TGGKV
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