| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1583 |
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| Symbol | |
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| ID | 7974812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1713021 |
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| End bp | 1713980 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792183 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002943500 |
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| Protein GI | 239814590 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAA AAATCACTTT CCTTTTGGCG CTCGTCGTTG CGCTGGTCCT GCCGCTGGTG
CTGCGCTCGG GTTCGCTCGC GAGCGAGGTG CTGATCTACG CGCTGGCGGC CCTGGGCTGC
AACCTGCTGC TGGGCTACAC GGGACTGCTC TCGTTCGGTC AGGGCATCTT CTTCGGCCTC
GGCAGCTACA CCATCGCGAT CCTGCTCACG CGGCTTTCGC TGCCGATGCC GCTTGCCTTG
CTCGCGGCCG TTGCCATGGG CGCATTGGGC GCGGCGGTGG TCGGCTGGGT CGCGATCCGC
CAGCGCGGCA CCTACTTCGT GATGCTCACG CTGGCCTTCG CGCAGATGTT CTACTTTGTG
GCGTACACCG CGTCGGGGCT CACGGGTGGC GACAACGGCC TGCTCGACGT GCCGCGCCCC
GCCTTCATGG ACACGCCCTG GAAGTACTAC GCCTTCGTGG CCGTGATGTT CCTCATCGCC
TTCGGCCTGC TGCTGCGCGT GACCGATTCG GTGTTCGGCC GCACGCTGCT GGCCATCCGC
GACAACGAGG ACCGCGCCGC CGCGGTGGGC TACGACCTCA AGCGCTTCAA GCTGCTGGCC
TTCGTGATCT CGGGCGCCGT CACCGGCCTC GCGGGTGGGC TGCACGCGAT GATGACCGGC
ATCGCACCGC TGTCGAATGC CGAGTACCAC ACGAGCGAGA TGATCCTGGT CATCACGGTG
ATCGGCGGCA CCGGCAACCT GTTTGCCTCG GTGCTGGGCT CGGCCTTCTA CGTGCTGCTG
GCCGACTGGC TCTCCACGCT GTGGCCGCGA TGGCTGCTGC TGCTGGGGCT GATGCTGATT
GCGGTGAGCA TCGGCATGCA GCGCGGCCTC TGGGGCCTGG GCGAAAGCGC ATGGCGGCGC
GTGTTCCGCA AGGTGCCGGC CGCCGCCAAG GCGCCGGCCG TGCAGGGAGA GCAGGCATGA
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| Protein sequence | MPKKITFLLA LVVALVLPLV LRSGSLASEV LIYALAALGC NLLLGYTGLL SFGQGIFFGL
GSYTIAILLT RLSLPMPLAL LAAVAMGALG AAVVGWVAIR QRGTYFVMLT LAFAQMFYFV
AYTASGLTGG DNGLLDVPRP AFMDTPWKYY AFVAVMFLIA FGLLLRVTDS VFGRTLLAIR
DNEDRAAAVG YDLKRFKLLA FVISGAVTGL AGGLHAMMTG IAPLSNAEYH TSEMILVITV
IGGTGNLFAS VLGSAFYVLL ADWLSTLWPR WLLLLGLMLI AVSIGMQRGL WGLGESAWRR
VFRKVPAAAK APAVQGEQA
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