| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1582 |
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| Symbol | |
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| ID | 7974811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1712152 |
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| End bp | 1713012 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792182 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002943499 |
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| Protein GI | 239814589 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCT ACCTGCTCCA GACCATCAAC GGAATCGGCA TCGGCATGCT GTATTTCCTG
CTGGCCGTTG GCTTGTCCAT CGTGTTCGGC CTGCTGCGCT TCGTGAACTT TGCGCACGGG
GCCTTCTACC TGCTGGGCGC GTACCTGTGC TTCCAGGCCA TGCAGTGGGG GCTCGACTTC
TGGGCCGCGC TGGTGCTGGT GCCGCTGTTC GTGGGCGCGC TCGGCTGGCT GGCCGAGAAG
CTGCTGCTGC GCCGCGTCTA TGCCAAGGCG CACGAGTTCC ACATTCTCGT GACCGTGGGG
CTTGCGCTCG CGGTGCAGGA GATCGTCATC GTGTTCTGGG GGCCGCTGGG CAACAGCGTG
GCGACGCCCG ACCTGCTGCA GGGCGTGGTG ATGTGGGGCA GCTTCATCTA TCCCAAGTAC
CGGCTGTTCG TGATCGGCTT CACCGCCGTG CTCGCGGTGC TCTTGTGGTG GGTGCTCGAA
GGCACGCGCC TGGGCAGCGC GGTGCGCGCT GGCAGCGAAT CGACCGAGAT GGTGTCGCTG
CTCGGCATCA ACGTGTTCCG CGTGTTCAGC CTGGTGTTCG CGCTGGGTGC GGCCACCGCG
GCACTGGCCG GCGTGCTGGC CGCGCCGATC CGGGGCGCGG AGCCCTTCAT GGGCGTGGAG
GCGCTCAGCG TGGCTTTCGT GGTGGTGGTG ATCGGCGGGC TCGGCAGCTT CGGCGGTGCG
CTGGTCGGCG GTCTGTTGAT CGGCATCGTG CAGAGCCTCA TGAGCACCAT CTGGCCGCCG
GGCGCGAGCC TGATGATCTA CGTGGCGATG GGGGCGGTGC TGCTGCTGCG CCCGCATGGC
CTGCTCGGCC GCAGAGGATG A
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| Protein sequence | MTVYLLQTIN GIGIGMLYFL LAVGLSIVFG LLRFVNFAHG AFYLLGAYLC FQAMQWGLDF
WAALVLVPLF VGALGWLAEK LLLRRVYAKA HEFHILVTVG LALAVQEIVI VFWGPLGNSV
ATPDLLQGVV MWGSFIYPKY RLFVIGFTAV LAVLLWWVLE GTRLGSAVRA GSESTEMVSL
LGINVFRVFS LVFALGAATA ALAGVLAAPI RGAEPFMGVE ALSVAFVVVV IGGLGSFGGA
LVGGLLIGIV QSLMSTIWPP GASLMIYVAM GAVLLLRPHG LLGRRG
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