| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1578 |
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| Symbol | |
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| ID | 7974807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1707365 |
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| End bp | 1708720 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792178 |
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| Product | beta alanine--pyruvate transaminase |
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| Protein accession | YP_002943495 |
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| Protein GI | 239814585 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTTG CAACGCCCGC CATCGAACCG ACGCCCGCCC TGCGCACCGA CGCCGCCTGG
CTCGACGCGC ACTGGATGCC CTACACCGGC AACCGCAACT TCAAGGCCGA TCCGCGCATG
ATCGTGGAGG CCAGGGGTGC CTACTTCACC GATGGCGACG GCCGCAAGAT CTTCGACGGC
CTCTCGGGCC TGTGGTGCTC GGGCCTCGGC CACGGCCGCC CTGAAATCAC CGAAGCGGTG
AGCCGCCAGA TCGCCAAGCT CGACTACTCG CCCGCCTTCC AGTTCGGCCA TCCGCTCTCG
TTCGAGCTGG CCAACAGGAT CAAGGAGCTC ACGCCCGCGG GCCTGGACTA CGTGTTCTTC
ACCGGCTCGG GCTCCGAAGC GGCCGACACT TCGCTCAAGA TGGCGCGCGC CTACTGGCGC
ACCAAGGGCC TTGCCAGCAA GACGCGCCTG ATCGGCCGCG AGAAGGGCTA CCACGGCGTC
AACTTCGGCG GCATCTCGGT GGGCGGCATC GCGGCCAACC GCAAGCTGTT CGGCCAGGCC
GTGGAGGCGG ACCACCTGCC GCACACGCAG ATCGCGGCCA ATGCCTTCAC GCGCGGCATG
TCCGAGAACG GCGCCGAGCT GGCCGACCGC CTGCTCGACC TGATCGCGCT GCACGACGCC
TCGAACATCG CGGCGGTGAT CGTGGAGCCC TTCGCGGGTT CGGCCGGCGT GGTGATTCCG
CCCAAGGGCT ACCTGAAGCG CCTGCGCGAC ATCTGCACCG CCAACAACAT CCTCCTGATC
TTCGACGAGG TCATCACCGG CTTCGGCCGC TGCGGCGCAC TCACGGGTGC CGATGCCTTC
GGCGTGACGC CCGACATCAT GAACATCGCC AAGCAGGTGA CCAACGGCGC GCAGCCGCTG
GGCGCGGTGA TTGCCAGCAA GGAGATCTAC GACACCTTCA TGGCGGCGGG CGGCCCCGAC
TACATGCTCG AATTCCCGCA CGGCTACACC TACGGCGCGC ACCCGGTGGC CTGCGCCGCC
GGCATCGCGG CGCTCGACGT GCTGCAGAAG GAAGACATGA TCGGCCGCGT GCAGGCGCTC
GCGCCGCACT TCGAGAACGC GGTGCACAGC CTCAAGGGCA GCAAGCACGT GACCGACATC
CGCAACTACG GCCTGGCCGC GGGCCTGACG ATTGCCGCGC TGCCGGGCGA GCCGGCACGC
CGGCCGTACG AGATCGCGAT GAACTGCTGG AAGAAGGGCT TCTACGTGCG CTACGGCGGC
GACACGATCC AGCTCGCGCC GCCCTTCATC GCCGAGAAGG CCGAGATCGA CCGCCTCGTC
AACGCACTGG GCGACGCGCT CGCAGAAACG GCCTGA
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| Protein sequence | MTLATPAIEP TPALRTDAAW LDAHWMPYTG NRNFKADPRM IVEARGAYFT DGDGRKIFDG
LSGLWCSGLG HGRPEITEAV SRQIAKLDYS PAFQFGHPLS FELANRIKEL TPAGLDYVFF
TGSGSEAADT SLKMARAYWR TKGLASKTRL IGREKGYHGV NFGGISVGGI AANRKLFGQA
VEADHLPHTQ IAANAFTRGM SENGAELADR LLDLIALHDA SNIAAVIVEP FAGSAGVVIP
PKGYLKRLRD ICTANNILLI FDEVITGFGR CGALTGADAF GVTPDIMNIA KQVTNGAQPL
GAVIASKEIY DTFMAAGGPD YMLEFPHGYT YGAHPVACAA GIAALDVLQK EDMIGRVQAL
APHFENAVHS LKGSKHVTDI RNYGLAAGLT IAALPGEPAR RPYEIAMNCW KKGFYVRYGG
DTIQLAPPFI AEKAEIDRLV NALGDALAET A
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