| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1563 |
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| Symbol | |
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| ID | 7974792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1690574 |
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| End bp | 1691836 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792163 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_002943480 |
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| Protein GI | 239814570 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGC TTTTTTCCAT TGCCTGGCGC AGCGCCTGGA ACCGGCGCTT CACGCTGGCG
CTCACGGTGT TCTCGATCGC GCTGTCGACC TTCCTGCTGC TCGGCGTGGA GCGCATCCGC
ACCGAGCTGC GCGAGAACTT CGCATCGTCC GTCTCGGGCA CCGACCTGAT CGTGGGCGCG
CGCACCGGCG CCACGCAATT GCTGCTGTAC TCGGTGTTCC GCATCGGTGC GGCCACCAAC
AACATTTCCT GGAAGAGCGT GCAGGCCCTG GCCGCGCACC CCGGCGTCGA CTGGGTGGTG
CCGCTTTCGC TCGGCGACTC GCACCGCGGC TTCGCGGTGC TCGCGACCTC GCCCGAATAC
TTCGCGCGCT TTCGCTACGG CAACCGCCAG CCGCTCGCGC TGCGCGAGGG CAAGCCCTTC
AGCGCGCTGT TCGATGCGGT GGTGGGCGCC GAGGTGGCCG ACAAGCTCGG CTACCACGTC
GGCCAGAGGA TCACGCTCGC GCATGGCAGC GGCGAACTCA ATGCGTCCGA GCATGCCGAC
AAGCCCTTCA CCGTGGTGGG CGTGCTCGCG CGCACCGGCA CGCCGGTCGA CCGCACGGTG
CACATCGGCC TGGAGGCGAT GGAAGCCATC CACCTCGAAT GGGTGGGCGG CGCGCCGATG
CCGGGCGTGA AGATCCCGGC CGAGCAGGTG CGCAAGTTCG ACCTCACGCC CAAGAACGTG
ACGGCCGCGC TCGTGGGCCT GAAGAACCGC TCGGCCGTGT TCGGCGTGCA GCGCTGGATC
TCCACCTACA CCGGCGAGCC GCTGATGGCC ATCCTGCCCG GCGTGGCGCT CGACGAGCTG
TGGAGCGTGA TCGGCATCGG CGAGAACGCC CTGCTGCTGA TGTCGGCGCT GGTGGCGCTG
GTGAGCCTTG CGGGCCTGGT CTCGGTGGTG ATGGCGGGGC TCAACGAAAG GCGGCGCGAA
CTGGCCGTGC TGCGCGCCGT GGGCGCCGGC CTGCGCCATG TGCTGGCGCT GCTTGCGCTG
GAGGGCGCCA TGGTCACCGT GCTGGGCGTG GCCTTCGGCG TGGTGATGGC GGTGCTTGGC
ATTGCCCTGC TCGCGCCATG GCTGCAGGCG CAGTTCGGGC TGACATTGAG CCTTTCGCCA
CCTACACTGA ACGAATGGCT GCTGATGGCG AGCCTGCTGG TCGCGGGCTG GCTGGCAAGC
CTGCTGCCGG GCATCCGCGC CTATAGGCTC TCGTTGGCCG ACGGCCTTTC CCCGAGGATT
TGA
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| Protein sequence | MKALFSIAWR SAWNRRFTLA LTVFSIALST FLLLGVERIR TELRENFASS VSGTDLIVGA
RTGATQLLLY SVFRIGAATN NISWKSVQAL AAHPGVDWVV PLSLGDSHRG FAVLATSPEY
FARFRYGNRQ PLALREGKPF SALFDAVVGA EVADKLGYHV GQRITLAHGS GELNASEHAD
KPFTVVGVLA RTGTPVDRTV HIGLEAMEAI HLEWVGGAPM PGVKIPAEQV RKFDLTPKNV
TAALVGLKNR SAVFGVQRWI STYTGEPLMA ILPGVALDEL WSVIGIGENA LLLMSALVAL
VSLAGLVSVV MAGLNERRRE LAVLRAVGAG LRHVLALLAL EGAMVTVLGV AFGVVMAVLG
IALLAPWLQA QFGLTLSLSP PTLNEWLLMA SLLVAGWLAS LLPGIRAYRL SLADGLSPRI
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