| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1559 |
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| Symbol | |
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| ID | 7974788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1685647 |
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| End bp | 1686435 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792159 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002943476 |
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| Protein GI | 239814566 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.682713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGAGC GCCGGGCTGG CAGAATTGCG CTGCACCACA AGAGAAAGCC AAGCGTGAAT
CCACACACAG GGACCAAGCC GGGAACAAGG CCGAAGGACG AGGCGCCCAC GCTGGACCGC
ACCACTTTCG GCCATCGGCT GCGCGCCGCG CGCAAGCGCT TCGGCTGGAC GCTGGCGCAG
CTGGCCGAGC GCTCGGGCGT GTCGATCACC ACCATCTCGC GCGCCGAGCG CGGCCAGCTC
GCGCTGGGCT ACGAGAACTT CACCGCACTC GGCCGCGCAC TCGAGATGGA CATGAACGCC
ATGTTCGCGG GCGCCGGCGT CAAGCCCGCG CAGCTCGACG GGCCGGTGGT CACGCGCGCC
GGCAAGGGCG TGGTGTACCG GGGCCTGTCG ATCGCCTACG AATTCCTCGG CACCACGGCG
GCCGGCAAGC AGATGAGCCC CATCGTGGGC ACGGTGCATG CGCGGCGCAT CCATGGGCCG
GAAGACTTCG TGCGGCATGC GGGCGAGGAG TTCGCCTATG TGCTGTCGGG CGAGATCGAG
GTGCACTTCG AGAACGGCGA AGTGGTGCAC CTTGCGCGCG GCGACTCGCT GTATTTCGAC
AGCCGCCTCG GCCATGCCTA TGTGAGCGTG AGCCGGCAGC TCGCGAAGAT CGTGGGCATG
ACCACGGCAG AGAGCGGGCA CATGCGGTCG GCGCGCGAGG CGCCTGCTTC CGGGCCGGTG
GGGAAGGTGC CGCCCAAACC CAAGCCCGCA GCCGCCGCGA AGAAAGCCAC GCGAGGCCGC
GGGGCCTGA
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| Protein sequence | MAERRAGRIA LHHKRKPSVN PHTGTKPGTR PKDEAPTLDR TTFGHRLRAA RKRFGWTLAQ
LAERSGVSIT TISRAERGQL ALGYENFTAL GRALEMDMNA MFAGAGVKPA QLDGPVVTRA
GKGVVYRGLS IAYEFLGTTA AGKQMSPIVG TVHARRIHGP EDFVRHAGEE FAYVLSGEIE
VHFENGEVVH LARGDSLYFD SRLGHAYVSV SRQLAKIVGM TTAESGHMRS AREAPASGPV
GKVPPKPKPA AAAKKATRGR GA
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