| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1558 |
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| Symbol | |
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| ID | 7974787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1684337 |
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| End bp | 1685497 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792158 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002943475 |
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| Protein GI | 239814565 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.120445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAA ACTCCAAAGC GCCCACGGTG GCCGACTACC TTGTGATTGG CGGCGGCATT
GCCGGGGCTT CGGTGGCCCA CTGGCTCGCC CCGCATGCCC GCGTGATCCT GCTTGAACGC
GAAGCCCAGC CGGGCTACCA CTCCACCGGC CGCTCGGCCG CGCTCTTCAT GGAAAGCTAC
GGCACCGCGC AGGTGCGCGC CCTCACCATG GCGAGCCGCG CCTTCCTCGA GCATCCGCCC
GAAGGCTTTT CCGAGCACCC GCTGCTCACG CCGCGCGGCG CGATGATGGT CGCGAGCACC
GAGCACCTGG CCGAGCTCGA GTCCCACTGG AACGTGCTGC GCGCCATGAA CACCGGCGCC
ACGCGGCTTG GCAGCGAAGA AGCGCTGGCA ATGGTGCCTG CGCTCAGGCC CGGGCAGGTG
GCCGGCGCCG TCTACGAACC CGACGCCGCC GACATGGACG TGCACGCCAT CCACCAGGGC
TACCTGCGTG GCATGCGGCA GGCCGGCGGC AAGCTGGTGT GCGATGCCGG CGTGACGGCC
ATCGAACGCA TCGGCGAGCG CTGGCGCGTG ACGGCTGGCG GCAATGTCTA CGAAGCACCG
GTGCTGCTCA ATGCCGCAGG CGCCTGGGTC GACACCATCG CGCAGATGGC CGGTGTGCAG
CCCATCGGCA TCGAACCGCG CCGGCGCTCG GCCTTCGTCT TCGCGCCGCC CGAAGGCAGC
AGCGTCGCGC ACTGGCCCAT GGTGTTCGGC GCCGACGAAG GCTGGTACAT CAAGCCCGAT
GCCGGCATGC TGCTCGGCTC GCCGGCCAAT GCCGACCTGG TCGAGCCGCA GGACGTGCAG
CCCGAGGAGC TGGACATCGC CTTCGCAATC CACCGCATCG AGGAAGCGAC CACGCTCGCC
ATCCGCCGGC CCGCGCGCAC CTGGGCCGGC CTGCGCTCCT TCGTGGCCGA CGGCGACCTG
GTGGGCGGCT TCGATCCGGA CGCGCCGGGC TTCTTCTGGG TTGCGGCGCA GGGCGGCTAC
GGCATCCAGA CCTCGGCGGC CATGGGCGAG GCCTGCGCCG CGCTGGCGCG CGGGCTGCCG
CTGCCCGAAC GCATCGCGGG ATTCGGCCTC ACGGCCGAGA TGCTCGGGCC GCAGCGCCTG
CGCACGGCCG CAGCCGGCTG A
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| Protein sequence | MTANSKAPTV ADYLVIGGGI AGASVAHWLA PHARVILLER EAQPGYHSTG RSAALFMESY
GTAQVRALTM ASRAFLEHPP EGFSEHPLLT PRGAMMVAST EHLAELESHW NVLRAMNTGA
TRLGSEEALA MVPALRPGQV AGAVYEPDAA DMDVHAIHQG YLRGMRQAGG KLVCDAGVTA
IERIGERWRV TAGGNVYEAP VLLNAAGAWV DTIAQMAGVQ PIGIEPRRRS AFVFAPPEGS
SVAHWPMVFG ADEGWYIKPD AGMLLGSPAN ADLVEPQDVQ PEELDIAFAI HRIEEATTLA
IRRPARTWAG LRSFVADGDL VGGFDPDAPG FFWVAAQGGY GIQTSAAMGE ACAALARGLP
LPERIAGFGL TAEMLGPQRL RTAAAG
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