| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1552 |
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| Symbol | |
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| ID | 7974781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1677328 |
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| End bp | 1678326 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792152 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_002943469 |
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| Protein GI | 239814559 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA CAACCGCAGC CCCGCTGCTC CAGGTGCGCA ACCTGCGCAA GCACTACCTC
TCGCCCAAGC GCTGGCTGCG GCCGGCCAGG CCCGCGATCC AGGCGGTCGA CGGCGTCTCG
TTCTCGGTGG CGCGCGGCGA AACGCTGTCG CTGGTCGGCG AATCGGGCTG CGGCAAGACG
ACCACCGCCA AGTCGGTGAT GCGGCTGGTG GAGCCGACCT CGGGCTCTGT GGAGCTCGAA
GGCGAGGAAT TGCTGACGCT CTCCGCCAGC GAAATGCGGC TGCGCCGGCG CCAGCTGCAG
ATCATCTTCC AGGACCCGTA CGCCTCGCTC AATCCGCGCC TCACGGCCGG CGACATCGTG
GCCGAGCCGA TGCGCAACTT CAGCAGCTTC GGCACGGGCA CGGCGGCCGA GCGGCTCGAA
CGCGTGCAGT GGCTGTTCTC GCGCGTGGGC CTCAGGCCCG AGGCGGCGAA GAAATTTCCG
CACGAGTTCT CGGGCGGCCA GCGGCAGCGG CTGGGCATTG CGCGCGCGCT GGCGCTCAAC
CCCAAGCTGA TCGTCTGCGA CGAGCCGGTG TCCGCGCTCG ACGTGTCGGT GCAGGCGCAG
GTGGTGAACC TGCTGATGGA CCTGCAGGCC GAGTTCGGCA TCGCCTACCT GTTCGTCGCG
CACGATCTCG CGGTGGTGCG CCACATCAGC CACCGCGTGG CTGTGATGTA CCTCGGCCAC
ATCGTCGAGA TCGCGGACCG GAACACGCTG TTTTCCGCGC CGCGGCATCC CTACACCGAG
ATCCTTCTTT CGGCCGTGCC CGTGCCCAAT CCGCGCACAC CGGCGCGCCG CATGCTGCTG
CAGGGCGACC CGCCGAGTCC CGCCAATCCG CCGTCGGGCT GCCGCTTCCA CACGCGCTGC
CCGATGGCAC AGGCGATGTG CAAGGAACAG GTGCCCGAGT TGACGGAACG GCCCTCGTCT
TCCAATGGCG GGCATTGGGT GGCTTGCCAC TTTCGCTGA
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| Protein sequence | MTTTTAAPLL QVRNLRKHYL SPKRWLRPAR PAIQAVDGVS FSVARGETLS LVGESGCGKT
TTAKSVMRLV EPTSGSVELE GEELLTLSAS EMRLRRRQLQ IIFQDPYASL NPRLTAGDIV
AEPMRNFSSF GTGTAAERLE RVQWLFSRVG LRPEAAKKFP HEFSGGQRQR LGIARALALN
PKLIVCDEPV SALDVSVQAQ VVNLLMDLQA EFGIAYLFVA HDLAVVRHIS HRVAVMYLGH
IVEIADRNTL FSAPRHPYTE ILLSAVPVPN PRTPARRMLL QGDPPSPANP PSGCRFHTRC
PMAQAMCKEQ VPELTERPSS SNGGHWVACH FR
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