Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1548 |
Symbol | |
ID | 7974777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1673272 |
End bp | 1674171 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792148 |
Product | Carboxymethylenebutenolidase |
Protein accession | YP_002943465 |
Protein GI | 239814555 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTTC GCGACGACAG CCGTTCCGAT TTCGATTCGC TTCGCCCCGG CCAGAGCACC GAGCAGGGCA CCACGCGCCG CACCGCGCTC AAGGCTGCCA TTGGCGTGGG CTATGCGGCC GCGGTCATGC CGGTCATGGC GCAGACCGCC GTCAGCACCT CGGCCGAAGG CCTGAAGGCC GGCCCGGTCA AGTACACCGT CAATGGCTTC GAGGTGCCGG CCTATGCGGC CGCGCCGGCC GGCAAGACCG GCCTGCCCGT GATCCTGGTG ATCCAGGAAA TCTTCGGCGT GCACGAGTAC ATCGCCGACA CCTGCCGGCG CTTCGCCCAG CTCGGCTACC TGGCCATTGC GCCCGAACTC TATGCACGGC AGGGCGATGC CAAGAGCTAC ACCGACATTC CCAAGCTGCA GGCCGACATC GTGAGCAAGG TGCCCGATGC GCAGGTCATG GCCGACCTCG ACGGCGCGCT GGCCTACGCC GCGGCCAATG GCGGCAGCGT GGCCAAGGCC GGCATCACCG GCTTCTGCTG GGGCGGCCGC ATCGTGTGGC TCTATGCGGC CACCGGCAAG GTGAAGGCCG GCGTGGCCTG GTACGGCCGG CTGGTCGGCC AGCCGAGCCA ACTCACGCCC AGGCATCCGA TCGACGTCGC GGCCAGCCTG CAGGCGCCCG TGCTCGGCCT CTACGGCGGC AAGGACCAGG GCATCCCCCT TGACACGGTT GATAAGATGA AAGCCGCCCT GGCCACCGGA ACCCCGGCGG CCAAGGCTTC GAGCTTCGTC GTGTATCCCG AAGCAGGCCA CGCGTTCCAT GCCGACTACC GCCCGAGCTA TGTAAAGAGC GCGGCCGAAG ACGGATGGCA GCGCGCCACG GCCTGGTTCA AAGCCAATGG CGTCGCCTGA
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Protein sequence | MSLRDDSRSD FDSLRPGQST EQGTTRRTAL KAAIGVGYAA AVMPVMAQTA VSTSAEGLKA GPVKYTVNGF EVPAYAAAPA GKTGLPVILV IQEIFGVHEY IADTCRRFAQ LGYLAIAPEL YARQGDAKSY TDIPKLQADI VSKVPDAQVM ADLDGALAYA AANGGSVAKA GITGFCWGGR IVWLYAATGK VKAGVAWYGR LVGQPSQLTP RHPIDVAASL QAPVLGLYGG KDQGIPLDTV DKMKAALATG TPAAKASSFV VYPEAGHAFH ADYRPSYVKS AAEDGWQRAT AWFKANGVA
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