| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1545 |
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| Symbol | |
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| ID | 7974774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1670054 |
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| End bp | 1671274 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792145 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_002943462 |
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| Protein GI | 239814552 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGTGT GTGTGCTCGG CGCCGGCATC GTGGGCCTGG CCACCGCCTG GCAGCTCGAA
CGCCGGGGCC ACCAGGTCAC GGTCGTCGAC CGCGCCGCCC CCGGTGCGGG CGCCAGCGGC
GGCAACGGCG CGCAGCTCAG CTACTCGTAC GTGCAGCCGC TGGCCGACCC GTCGATCTGG
AAGCAGCTGC CCAAGCTGCT GCTCTCGCCC ACCTCGCCGC TCAAGCTGCG GCCCCAGCTC
GACCCGCTCC AGTGGCGCTG GGGGCTGGCG TTCATGGCGG CCTGCAATGC GCAGACCTCG
CGCAGCACCA CCGCGCAATT GCTCGCGCTG GCCGCGCTGA GCCGCACCGG CTTCGAGGAA
ATGCAGGCCG ACGTGGCACC CGACTGCGAC TTTTCCGCCA CCGGCAAGCT GGTGCTGTAC
GCCAGCGCAG CCTCGCTCGA CGGCGCACGC GCGCAGCTCG AACTGCAGCG CGCCATGGGC
AGCGAGCAGC GCATCGTCTC GCCCGACGAA TGCGCCGCCA TCGAACCCGC GCTCGCGGAC
TACCGCGGCC AGATGGCGGG CGCCGTCTAC ACGCCGAGCG AATGCGCGGC TGACTGCCTC
AAGGTCTGCG CCGAACTGCA GCGGGTGCTC GGCGCGCGCG GCGTGCGTTT TGTGCTCGGC
ACCGACGTGC ACGGCTTCGC ACGCGGCAAC GGCCGGGTGG CGGCGGTGCA GACGAGCGCC
GGCGACATCG AGGCCGATGC CTTCGTGATG GCACTGGGCT CGGCGTCACA CAGGCTCGGG
CGCGCGCTGG GCGCCTACCT GCCGGTGTAT CCGCTCAAGG GCTACAGCAT CACGGTGGAG
GTCGACCCCT CGCCCGGCGC CGCGCCCACG GTGAACGTGA CCGACAGCGC CCGCAAGGTG
GTGTTCGCGC GCATCGGCTC GCGGCTGCGC GTGGCGGGCA TGGCGGAACT GGTGGGGCAC
GACGCGAGCA TTCCGGCCAC GCGCATCGAG ACGCTGGCTG CCGCCACGCG CGCCGTCTTC
CCGCATGCAA GCCGGCTCGA GGAACTGCAT CCGTGGACCG GCATGCGGCC GGCCACGCCC
AAGGGGCTGC CGATCATCGG GCGGCTCGCG AGCGCGCCCG CAAACATGCT GTTCAACACG
GGGCATGGCG CACTGGGCTT CACGCTGGCT TTCGGCTCGG CGCAGCGGAT TGCCGAGGCG
CTGGAGCCCG CGGCTTCCTG A
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| Protein sequence | MHVCVLGAGI VGLATAWQLE RRGHQVTVVD RAAPGAGASG GNGAQLSYSY VQPLADPSIW
KQLPKLLLSP TSPLKLRPQL DPLQWRWGLA FMAACNAQTS RSTTAQLLAL AALSRTGFEE
MQADVAPDCD FSATGKLVLY ASAASLDGAR AQLELQRAMG SEQRIVSPDE CAAIEPALAD
YRGQMAGAVY TPSECAADCL KVCAELQRVL GARGVRFVLG TDVHGFARGN GRVAAVQTSA
GDIEADAFVM ALGSASHRLG RALGAYLPVY PLKGYSITVE VDPSPGAAPT VNVTDSARKV
VFARIGSRLR VAGMAELVGH DASIPATRIE TLAAATRAVF PHASRLEELH PWTGMRPATP
KGLPIIGRLA SAPANMLFNT GHGALGFTLA FGSAQRIAEA LEPAAS
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