| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1543 |
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| Symbol | |
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| ID | 7973143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1667839 |
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| End bp | 1669125 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792143 |
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| Product | glutamate carboxypeptidase |
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| Protein accession | YP_002943460 |
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| Protein GI | 239814550 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTCC AGCCCCGCAA ATTCCTGCTC GCCGCCGTTT GCGCCGCCTG CCTGGGCACC
GCGTTTGCCG CACCCGATGC CCGCATCGCC TCGCTGGCCG CCAAGGAAAA GCCCGCGCTG
CTCGAGACGC TGAAGGAGCT GGTCTCGATC GAATCGGGCA GCCGCGACCT CGAAGGCCTG
GAGAAGATCT CGGACCTCAT CGCGGCAAAA TTCAAGGCCA TGGGCGGCGA GGTCGAGCTG
GTCGACACCA GCGCCGAGGC CTACCGCATG GAAGACACGC CCGAGAAGAT CGGCCGGGCG
GTGCGCGCCA CCTTCAAGGG CACGGGCAAG AAGAAGATCA TGCTCATCGC GCACATGGAC
ACGGTCTACA CCGTGGGCAT GCTCGACAAG CAGCCGTTCC GCATCGAAGG CGACAAGGCC
TATGGCCTGG GCATTGCCGA CGACAAGCAG GGCGTGGCCG TCATCACGCA CACGGTCGCG
ATGCTGCAGG CGCTGAAGTT CAAGGACTAC GGCACGCTCA CGGTGCTCAT CAACGGCGAC
GAGGAAATCA GCTCGCCGGG TTCGCGCGCG CTCATCACGC GGCTGGGCGG CGAGCACGAC
GCGGTGCTGT CGTTCGAGGG CGCTTCGGTC AAGGAAGACA AGCTCTCGCT GGCCACCGCG
GGCATTGCCT CGGTCACGCT CAATGTCACG GGCAAGGCCT CGCACGCGGG TTCGGCGCCG
GAACTGGGCG TGAATGCGCT CTACGAGTTG TCGCACCAGA TCCTGCAGAT GCGCGACCTG
TCCGACCCGG CCACCGGGCT CAAGATGAAC TGGACCATCT CGCGCTCGGG CAGCAATCGC
AACGTGATTC CGGCCAGCGC CACCGCGGGC GCCGATGTGC GCGTGCTCAA GGTGAGCGAC
TACGACCGCA TCGAGCAGCA GGTGCAGGAG CGCGTGAAGA AGCAGCTGAT CCCGGAGGCC
AAGGTCGCGA TGAAGTTCGA GCGCCGCCGT CCGCCGCTCG AAGCCACCGG CGCCTCGCTC
GCACTCGCCA GGCACGCGCA GCAGATCTAC AAGGACGAGC TCGGCCGGCC GCTGGGCGCC
GACGACAAGG TGGCCGGCGG CGGCACCGAT GCCGCCTTTG CCGCGCTCAA GACCAAGGCG
CCGGTGGTGG AGCGCTTCGG CCTGCAGGGC TTCGGCGCGC ATTCGGCCGA TGCCGAGTAC
GTGCTGGTCG ACTCCATCGA GCCGAGGCTC TATCTTGCGA CCCGCATGGT GATGGATCTC
TCCCGCAGCA AGATCGCAGG CAACTGA
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| Protein sequence | MTFQPRKFLL AAVCAACLGT AFAAPDARIA SLAAKEKPAL LETLKELVSI ESGSRDLEGL
EKISDLIAAK FKAMGGEVEL VDTSAEAYRM EDTPEKIGRA VRATFKGTGK KKIMLIAHMD
TVYTVGMLDK QPFRIEGDKA YGLGIADDKQ GVAVITHTVA MLQALKFKDY GTLTVLINGD
EEISSPGSRA LITRLGGEHD AVLSFEGASV KEDKLSLATA GIASVTLNVT GKASHAGSAP
ELGVNALYEL SHQILQMRDL SDPATGLKMN WTISRSGSNR NVIPASATAG ADVRVLKVSD
YDRIEQQVQE RVKKQLIPEA KVAMKFERRR PPLEATGASL ALARHAQQIY KDELGRPLGA
DDKVAGGGTD AAFAALKTKA PVVERFGLQG FGAHSADAEY VLVDSIEPRL YLATRMVMDL
SRSKIAGN
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