Gene Vapar_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1535 
Symbol 
ID7973135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1654252 
End bp1654713 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID644792135 
Productazurin 
Protein accessionYP_002943452 
Protein GI239814542 
COG category[C] Energy production and conversion 
COG ID[COG3241] Azurin 
TIGRFAM ID[TIGR02695] azurin 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGCC GCCGCCTCGC CGCCACCGCC GTTCTGGCGC TCGCTTCTCT CGCCGCTTCC 
TCCGCCTTCG CTGCCGACTG CAGCGTGGAG ATCGAAGGCA ACGACGCGAT GCAGTTCAAC
AAGCCCGCCA TCGAGGTGAG CAAGAGCTGC AAGGAATTCA CCGTCAAGCT CAAGCACGCC
GGCAAGCTGC CGAAGCAGGC CATGGGCCAC AACTGGGTGC TTGCCAAGAC GGCCGACGTG
CAGGCGGTCG CCGCCGACGG CGTTGCTGCC GGCCTGCCGC AAGATTATGT GAAGGCCGGC
GACGCGCGCG TCGTGGCGCA CACCAAGGTC GTCGGCGGCG GCGAAAGCGA CAGCGTGAGC
TTTCCGGTCG CCAAGCTGGG CGCGGCCGAC AGCTACACCT TCTTCTGCTC CTTCCCGGGC
CATTCGTCGA TCATGAAGGG CACGCTGAAA CTCGTGAAGT AA
 
Protein sequence
MLRRRLAATA VLALASLAAS SAFAADCSVE IEGNDAMQFN KPAIEVSKSC KEFTVKLKHA 
GKLPKQAMGH NWVLAKTADV QAVAADGVAA GLPQDYVKAG DARVVAHTKV VGGGESDSVS
FPVAKLGAAD SYTFFCSFPG HSSIMKGTLK LVK