Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1533 |
Symbol | |
ID | 7973133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1652053 |
End bp | 1652919 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644792133 |
Product | hypothetical protein |
Protein accession | YP_002943450 |
Protein GI | 239814540 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTCGT ACGAACCCGC CTGGCTGGAA GGCATGTACA ACAATCTTGC GCGCGTGAAG GACCACCCGG CGTACTTCGC CCGCTGGGGG CGCGACTCGC AAGCCGTGCG CGAAACCCTG GCCGGCCGCA TCGACGTGCC CTATGGCCCG GGCGTGAACG AGACGCTCGA CCTCTTTCCC GCACCCGTGC CCGGCGCGCC GGTGCTGGTG TTCATTCACG GCGGCTACTG GCGCGGGATG GACAAGCGGG ACCATTCCTT CATTGCGCCC GCATTCAACG ACCGCGGCGT GTGCGTGGTG ATGCCCAACT ACGCGCTGTG CCCCGGGACG GCGGAGGAAC CCGTGACCGT GCCGGGCATC CTCATGCAGA TGGTGCGCGC GCTCGAGTGG ACCTGGCGCC ATGCCGCGAG CTTTGGTGCC GACCCCTCGC GCATCACCGT GGCCGGGCAC TCGGCCGGCG GCCACATGGC GGCGGCGCTG CTGGCCTGCG ACTGGAAGGC GGCCGCGCCC GACCTGCCGG CGCAGCTGGT GCGCAATGCG TTGTCGATCT CGGGCCTGCA CGACCTTCGG CCGCTGCAGC GCACGCCGTT TCTCGAAAAC GTCCTGAAGC TCGGCGATGC GGATGCGCGG CGCGCCAGCC CCGCGCTCTG GCCGGCCCCC GCGCGCGGCC AGCTGCATGC GCTGGTGGGG GCCGAGGAGA GCGAAGAGTT CATTCGCCAG AATGCGTTGA TTCGCCAGGC GTGGGGCCGC AACGCCGTGC CCGTGTGCGA ATCGCTTGCC GGGCTGAACC ACTTCAGCAT CGTCGACGCG CTGGCGGATC CGGCCCACAG GCTGCATCGC GACGCGGTGC AGCTGCTGGA GGCCTGA
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Protein sequence | MASYEPAWLE GMYNNLARVK DHPAYFARWG RDSQAVRETL AGRIDVPYGP GVNETLDLFP APVPGAPVLV FIHGGYWRGM DKRDHSFIAP AFNDRGVCVV MPNYALCPGT AEEPVTVPGI LMQMVRALEW TWRHAASFGA DPSRITVAGH SAGGHMAAAL LACDWKAAAP DLPAQLVRNA LSISGLHDLR PLQRTPFLEN VLKLGDADAR RASPALWPAP ARGQLHALVG AEESEEFIRQ NALIRQAWGR NAVPVCESLA GLNHFSIVDA LADPAHRLHR DAVQLLEA
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