| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1532 |
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| Symbol | |
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| ID | 7973131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1649871 |
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| End bp | 1651562 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792131 |
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| Product | histidine kinase dimerisation and phosphoacceptor region |
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| Protein accession | YP_002943449 |
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| Protein GI | 239814539 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCCC ACTCCATCGA CCCGGATTCC GGGACCGACT CCAGCCTCAG TGCCGATGCG
CTCATGGTGG CGCGGATGCG GCTGGTGCTG TCGGTGTCGG CGCTGCTGGC GGTTGCGGTT
GATCTTCACG ATGCGCCGCA GCGGGTCGTA GGCAACGCGG TCTGGCTCAC CTTCTCCTGC
TACGCGATCT ACAGCCTGGG CGTGTACATC TGCACGCGCA AGGGCCAGCC CTACTTCCAG
GGCAAGGCCA TCCACTGGTT CGATGTGCTG TGGTTCACGC AGATCGTCTT CGCGAGCGGC
GGCACGGGCA GCCTTTATTT TCTTTTCTAC TTCTTCGCCA TCCTCACGTC GTCCTTCCGG
TGGGGATACG AGGAAGGCGC CCGGGTCACC ATGGCCTCGG TCGCCTCGTT TGCCGTCTGC
GGCCTGGGAG CGAGCCTCGC GGGCGACACG CCGCAGCTGC TGATGCGCAC CACCTTCCTG
CTGGCACTGG GCCACATGAT CGGGCACTGG GGCGGATCGA AGGTCGAGCT GCGGCGGCGC
CTTTCCCTGC TGAGCCAGGT GAGCCGGCTG TCGAACCCCC GGTTCGGCGT GGCCCGCACG
ATCGCCAGCA CCATGGAGAA GACGCTGGCC TTCTACAAGG CAAGCCACTG CGTGCTCCTG
ACGCGCGACA CGGCCACCGG CAGCTGGGTC ATGCGCACGC TCAGGCAAAG CCACGCGGGC
GAGGCGGTCG ACGTCGAGAC CATCGACCAG GCTTTCGAAT TGCCGCTGAT GACGCTGAAC
CCCGGCCACA TCGTGCTGCG CAACCGCCTG CCCTGGCCGC TGAGCCGGCT GTGCGTGCAG
GGCCATGCCT TCGACCTGCG CCTGCGCCGC TGGTACCCGC AGGACGAGCC GGGCCTGCGG
CGCAGCGCCG CGGTTGCCGC CATGCTGGAG GCGCGCTCCT TCATCAGCGC ACCGCTGCCG
ATGCGCCAGG GAGAAGGACG CATCTACGTC TCGTCCAGCG AGGGGCTGTT CCGCAAATCG
GACGCGCTGT TCCTGGCGCA CATGATGAAC CAGGTCTTTC CCGTGATCGA GACGATCGGC
GTGCTCGACC GGATGGCCTC GGAGGCGGCC TCGAAGGAGC GCCTGAAGAT CTCGCTGGAC
CTGCACGACA CCGCGATCCA GCCCTACATC GGCCTGAAGC TGGGGCTGAG TGCGCTGCGC
AAGAAGGCGG GCGCCGACAA CCCGCTGGTC GAAGACCTGG ACAAGCTCGC CAGCATGGCC
GATGGCGTGG TGGCCGACTT GCGCCACTAT GCAGGCATCG TCAAGCATGG CGGCGAAAGC
CACTGCGAGT TCATTCTTCC GCACCTGCAC CGCCAGGCCG CGCGCATCAA GACGCTCTAC
GGCATCGACA TGGAGATCCT GGTCGATGGC GATGTCCACC TGGACGACCG GATGACGGCC
GAAGTGCTGC AGCTGGTGCG CGAAGGACTG AACAACATCT GCAAGCACAC CCATGCGCAC
CGCGGCTGCA TCCGCATCGG CTGCGGGGAC GGCAAGCTGC AGATCAGGAT CGAAAACGAG
TCCTGCGGCA TGGATTTCTC GAACTTCCGC CCACGTTCCA TCAGCGAACG CGCAGCCGCC
CTCGGCGGGC ATGCGCAGGT CGGCCAGGGC GCGGGCGGCG CCACGGCCGT ACTGATCGAA
ATACCCATCT AG
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| Protein sequence | MQAHSIDPDS GTDSSLSADA LMVARMRLVL SVSALLAVAV DLHDAPQRVV GNAVWLTFSC
YAIYSLGVYI CTRKGQPYFQ GKAIHWFDVL WFTQIVFASG GTGSLYFLFY FFAILTSSFR
WGYEEGARVT MASVASFAVC GLGASLAGDT PQLLMRTTFL LALGHMIGHW GGSKVELRRR
LSLLSQVSRL SNPRFGVART IASTMEKTLA FYKASHCVLL TRDTATGSWV MRTLRQSHAG
EAVDVETIDQ AFELPLMTLN PGHIVLRNRL PWPLSRLCVQ GHAFDLRLRR WYPQDEPGLR
RSAAVAAMLE ARSFISAPLP MRQGEGRIYV SSSEGLFRKS DALFLAHMMN QVFPVIETIG
VLDRMASEAA SKERLKISLD LHDTAIQPYI GLKLGLSALR KKAGADNPLV EDLDKLASMA
DGVVADLRHY AGIVKHGGES HCEFILPHLH RQAARIKTLY GIDMEILVDG DVHLDDRMTA
EVLQLVREGL NNICKHTHAH RGCIRIGCGD GKLQIRIENE SCGMDFSNFR PRSISERAAA
LGGHAQVGQG AGGATAVLIE IPI
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