| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1531 |
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| Symbol | |
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| ID | 7973130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1649163 |
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| End bp | 1649852 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792130 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_002943448 |
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| Protein GI | 239814538 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCCA CAACAACACC CCCCATCGGC GTCATGCTCG TGGACGACCA CCAGACCATG
CTGTGGGGCC TGTCGAAGCT GATCGACGGC GAGCAGCCGC GCATGAAGGT CGTTGCCACG
GCCAACTGCT TCGAGCAGGC GCTGGAGCGG ACCGAGCACC TGGTGCCCGA CGTGATCCTG
CTCGACCTGG ACCTGGGGGG CCGATGCTCC CTCGACATCC TTCCCAAGCT GCTGTCGAAC
GACGTCTCGC GCGCGCTCAT CCTCACGGCC GAGCGCAAGC AGCAGACGCT GGACCTTGCC
GTGCTGCGCG GCGCCAGGGG CGTGCTGTGC AAGGACGCTT CGGCCGAAGA GGTGATCGAT
GCGATTGCGC GCGTGCACAA CGGCGAACTG TGCATCGACG CGCAGGCCAT GGGCCGCGTG
TTCTCCGAGC TGACCGCGCC GAAGAAGCCG GTGAAGGCAG ACCCCGAAGC GGCCCGGATC
GCGAGCCTCA CGCAGAAGGA GCGGCAGATC ATCCGCGCCG TGGTGGAAGG CAGCGGCGCC
GCGAACAAGA CGCTCGCCTC GCGGCTGTTC GTGACCGAAC ACACCTTCCG CAATCACCTC
ACGTCGATCT ACCAGAAGCT CGACGTGGCC AACCGGCTCG AGCTTTACAT CTACGCGATC
AAGCACCAGC TCGACGCTGC GCCCCATTGA
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| Protein sequence | MQATTTPPIG VMLVDDHQTM LWGLSKLIDG EQPRMKVVAT ANCFEQALER TEHLVPDVIL
LDLDLGGRCS LDILPKLLSN DVSRALILTA ERKQQTLDLA VLRGARGVLC KDASAEEVID
AIARVHNGEL CIDAQAMGRV FSELTAPKKP VKADPEAARI ASLTQKERQI IRAVVEGSGA
ANKTLASRLF VTEHTFRNHL TSIYQKLDVA NRLELYIYAI KHQLDAAPH
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