| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1515 |
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| Symbol | |
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| ID | 7973114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1637126 |
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| End bp | 1637833 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792114 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002943432 |
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| Protein GI | 239814522 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATA CCACCACCAT GTCCCATGTT GTGATCACCG GGGCCGCGGG CGCGCTGGGC
CGTGCGGTGG TCCAGCATTT CCTCGAGCAG GGCGCGCGCC TGGCGCTGGT CGACCACCGG
GCGGACCGCC TGGCCGAGGT CTTTCCGGGC CTGGACAATT CGCAGCACCT GCTGCTGGCG
GGCGACGTGA CCTCGGCGGC CGACATGACC GAACTCGCGA GCCAGGCGCT CAAGGCCTTC
GGCCGCATCG ACGCGCTGGT CCACATTGCC GGCGGTTTCG AGATGGGCGA GGCCACGCAT
GCGCTCTCGC GGGCAAGCTG GGACCGCATG ATGAACCTCA ATGCCTGGTC CTTCGTGGCG
GTGACGCAGG CGGTGCTGCC CTCGATGATC GAGCACGGCG CCGGCCGCAT CGTGGCGGTC
ACGGCCAAGG TGGCGGCGCG CGGCCTGCCG GCCATGGCGG CGTACATCGC GTCGAAAAGC
GCGCTGCAGC GCCTGGTCGA GGCCGCGGCC GCCGAGGCCG CCCCGCATGG CGTGGCCATC
AACAGCGTGG CGCCCAGCGT GCTCGACACG CCGGCCAATC GGCAGGCCAT GCCGGACGCC
AATCCTGCCG ACTGGGTGTC GACCGCCGTC GCGGCGCAGA CCATCGGCTT TCTTGCGTCG
CCCGCGGCCG CGGCGCTGCA CGGGCAGCAC CTGACGCTCG ACACCTGA
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| Protein sequence | MTDTTTMSHV VITGAAGALG RAVVQHFLEQ GARLALVDHR ADRLAEVFPG LDNSQHLLLA
GDVTSAADMT ELASQALKAF GRIDALVHIA GGFEMGEATH ALSRASWDRM MNLNAWSFVA
VTQAVLPSMI EHGAGRIVAV TAKVAARGLP AMAAYIASKS ALQRLVEAAA AEAAPHGVAI
NSVAPSVLDT PANRQAMPDA NPADWVSTAV AAQTIGFLAS PAAAALHGQH LTLDT
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