| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1505 |
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| Symbol | |
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| ID | 7973103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1628216 |
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| End bp | 1629271 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792103 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002943422 |
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| Protein GI | 239814512 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.122982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATGGG ACGTGGCGCT GATTCTCGTC ACCGATGGCC TGGCCAACGG TGCCGTCTAT
CTGCTGGCAG GGCTCGGGCT GGTGCTGATC TTTTCCGTCA CGCGGGTGGT GTTCGTGCCG
TTCGGCGACA TCGCGGCCTT TGCGGCGCTG TCGCTCGCGG CCTTCGAAAC CGGCCGCGTC
CCGCCGACCA TCGGCATGGT CGCCGTGCTT GCGGCGCTCG CGCTGGCAAC GGAGATCGGC
AGCCTGCTGC GGCGCGGCGA GGCCGCGCGC ATACCCAAGG CGTTGCTGAT GTGGGGCGTG
CTGCCTGCGA TTCCGTGTGT GCTGGCCTGG CTGGCGGCGC GGCCCGGCGT GCCGGTGGCG
GTGCACATTG CCGTGGCGGT GCTGCTGGTG GTGCCCATTG CGCCGCTGCT CGCGCGGGTG
GTGTTCCAGC CGATCGCGGA TGCCTCGGTG CTGGTGCTGC TGATCGTGTC GCTGGCGCTG
CACTTCCTGC TGTCGGGACT GGGCCTCCTG TTCTTCGGAC CTGAAGGCTC GCGCACCACG
CCGCTCACCA GCGCGGTGTT CACGCTCGGC GACGGCTTCA CGGTCAGCGG CCAGGTGGTG
CTGATGGTGG GGGTGGCCAT CGTGCTGAGC GGCCTCTTCT TCCTGGTGTT CGAGCGCACG
GTGGCCGGCA AGGCGCTGCG CGCCACGGCC GTCAACCGCG TGGGCGCGCG GCTGGTCGGC
ATCCGGCCGG TGCGCACGGC GCTGCTGGCC TATGGCTGCG CCTCCCTGCT GGCCGGCCTC
ATCGGCGTGC TGATCGCGCC GGTGACCACC ATGTACTACG ACTCGGGCTT CATCATTGGT
CTCAAGGCCT TCGTGGCCGC GATCATCGGC GGGCTCGTGA GCTACCCGAT GACCGCCGTG
GGCGCGCTTG CCGTGGGCGT GGTGGAAAGC TTCGCCTCCT TCTGGAGCGG GGCGCTGAAG
GACGTGATCG TGTTCAGCCT GCTGATCCCG GTGCTGATGC TCAGGTCGTT CATGGCGGCC
CATGCCGAAG AGGAAGAAGA CGAGGTGGAC CAATGA
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| Protein sequence | MTWDVALILV TDGLANGAVY LLAGLGLVLI FSVTRVVFVP FGDIAAFAAL SLAAFETGRV
PPTIGMVAVL AALALATEIG SLLRRGEAAR IPKALLMWGV LPAIPCVLAW LAARPGVPVA
VHIAVAVLLV VPIAPLLARV VFQPIADASV LVLLIVSLAL HFLLSGLGLL FFGPEGSRTT
PLTSAVFTLG DGFTVSGQVV LMVGVAIVLS GLFFLVFERT VAGKALRATA VNRVGARLVG
IRPVRTALLA YGCASLLAGL IGVLIAPVTT MYYDSGFIIG LKAFVAAIIG GLVSYPMTAV
GALAVGVVES FASFWSGALK DVIVFSLLIP VLMLRSFMAA HAEEEEDEVD Q
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