| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1498 |
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| Symbol | |
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| ID | 7973096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1620781 |
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| End bp | 1621593 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792096 |
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| Product | cyclase family protein |
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| Protein accession | YP_002943415 |
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| Protein GI | 239814505 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1878] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.730756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA CAACCGAACT GATGTCCGCC GCCGAAATCC TCGGCGGCCT CGTGACCGCG
ATGGCGAGCG GCCGCATCCG CGTGATCGAC CTCACGCAGA CGCTCACGCC CGAGTTTCCG
CAGATCGCCT TGCCGCCCGA GATGGGCCAG TGCTGGCCCT TCCGCATCGA GGAAGTGTCG
AAGTACGACG AGCGCGGCCC GGGCTGGTAC TGGAACAATT TTTCCTGCGG CGAGCACACG
GGCACGCACT TCGATGCGCC GATCCACTGG ATCTCGGGCC GCGACCTGCC GAACAATTCG
GTCGACACGA TTCCGGTGCA GAACTTCGTG GCGCCGGCCT GCGTGATCGA TTGCTCGGCC
GACGTGCAGG CGAACGACGA CTACCTGCTG AGCGTGGCCG ACATCGAGCG CTACGAGGCG
GCGCACGGCC GCATCCCGAA GGGTGCGTGG GTGCTGATGC GCACCGACTG GTCCAAGCGC
AGCGACCCCG AGGCCTACCA GAACTTCGAC GAGACCGGCC AGCACACGCC CGGCCCGAGC
ACCGAGGCCG TGCGCTTTCT GGTCGAGCAG CGCGACGTGC TGGGCTTCGG CTCGGAAGCC
ATCGGCACCG ATGCCGGGCA GGGCTACCAC CTGCGCCCGC CGTATCCGTG CCACTACTAC
ATGCATGGCG CAGGCCGCTA CGGGCTGCAG TGCCTGAGCA ACCTCGACCT GCTGCCGCCC
TCGGGTGCGG TGCTGATCTG TCCGCCGCTC AAGATCGAGA AGGGCAGCGG GAGTCCGCTG
CGTGTGCTGG CGCTGGTAGG GGCGCCATCA TGA
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| Protein sequence | MTTTTELMSA AEILGGLVTA MASGRIRVID LTQTLTPEFP QIALPPEMGQ CWPFRIEEVS
KYDERGPGWY WNNFSCGEHT GTHFDAPIHW ISGRDLPNNS VDTIPVQNFV APACVIDCSA
DVQANDDYLL SVADIERYEA AHGRIPKGAW VLMRTDWSKR SDPEAYQNFD ETGQHTPGPS
TEAVRFLVEQ RDVLGFGSEA IGTDAGQGYH LRPPYPCHYY MHGAGRYGLQ CLSNLDLLPP
SGAVLICPPL KIEKGSGSPL RVLALVGAPS
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