| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1490 |
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| Symbol | |
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| ID | 7973088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1610172 |
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| End bp | 1612364 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792088 |
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| Product | Indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_002943407 |
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| Protein GI | 239814497 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGC GTTCGTTCGT CGAAGAAGTC AAGAAGCTGC GGCTTTCTGG CGGAGATGTG
TTTCGCGGTG AAGGCATTCT GGCGGTCACC AAGGCTTTGC TCGAATCGGG AGTTTCCTAT
GTGGCGGGGT ACCAGGGGGC ACCCATCTCG CACCTGATGG ATGTGCTGGC CGATGCGCAG
GACATCCTGG CCGAGCAGGG CATCCGCTTC GAGAACAGCG CGAGCGAAGC CACCGCGGCC
GCCACGCTGG CCGCTTCCGT CAACTATCCC TTGCGCGGCG CCGTCACCTT CAAGGCTACC
GTGGGTACCA ACGTGGCCTC GGACGCGCTG GCCAACCTGG CCTCGGGCGG CGTGACCGGC
GGCGCGCTGA TCATCGTGGG CGAGGACTAC GGCGAGGGCT CCTCGATCAT GCAGGAGCGC
AGCCATGCCT TCGCGATGAA GTCGCAGATC TGGCTGCTCG ACCCGCGGCC CAACCTGCCG
AGCATCGTCG ATGCGGTGAA GCAGGGCTTC GATCTTTCGG AGGCCAGCAA CACGCCCGTG
ATGCTGCAGC TGCGCATCCG CGCCTGCCAT GTGCACGGCC ACTTCATTGC CGGCGACAAC
AAGCGCGCGA AGTTCACGCT GAAGGATGCG CTCGAAAATC CGCAGCGCGA CGTCGGCCGC
ATCGTGCTGC CGCCCGCGAG CTTCGTGCAC GAGCAGGAGA AGGTGCGGGA CCGCTGGCCC
GCGGCCGTGC GCTTCATCGA GGAGCGCCAG CTCAACGAGT TCTTCTCGGA AGACGCCGAC
GACATCGGCA TCATCGTGCA GGGCGGCAGC TACAACACGC TGCTGCGCGC GCTCGAGCGG
CTCGGCCTGG CCGACGTGTA CGGCAACACG CAGGTGCCGC TCTATGTGAT GAACGTGGCC
TACCCGGTCA TCGAGAGCGA GGTGATCCGC TTCTGCGAAG GCAAGCGCGC GGTGCTGATC
GTGGAGGAGG GCCAGCCCAA CTTCGTCGAA CAGAACCTTG CGACCATCCT GCGGCAGGCC
GGCTCGGCCA CCGCGCTGCA TGGCAAGGAC ATGCTGCCCG TGGCCGGCGA GTACACCGCA
TCCGAACTGC TGAAGGGCGC GCGCAGCTTC TGCGAGCGCT ACGGGCGCCT CGCGCCGCTG
CCGGTGCCTG CGCCGGTGCG CAAGGTGATT CCGCTCAAGG AAGTGGCGGC CATCGGCGTC
GATGCCGCGC CGGAGCCGGC GCAGCCGTCC ACCGCGCTCG CCGAGGTCGT GCATGCGCGC
CCGCCGGGCT TTTGCACCGG CTGCCCCGAG CGGCCCATCT TCAGCGCGAT GAAGCTGGTC
GAGCGCGAGC TGGGTCCGCA CCACGTGAGC GCCGACATCG GCTGCCACCT GTTCTCGATC
CTGCCGCCCT TCAACATCGG CAACACCACC ATGGGCTACG GCCTGGGCGG TGCCGGCGCG
GCGGCGCTCA ATGCGCCGGC AGGCAAGCGC GCGATCTCGA TGATGGGCGA CGGCGGCTTC
TGGCACAACG GACTGACCAG CGGCGTGGCC AACGCGGTGT TCAACAAGAG CGACAACCTC
ACCATCGTCG TCGACAACAA TTACACCTCG GCCACGGGCG GGCAGGACAT CCTCTCGTCG
AACGCCGTCA ACAAGACGCG CAGCACCGGC CACGAGATCG AGCGCGCGGT GCGCGGGGTG
GGCGTCGAAT GGGTGAAGAC GCTGCGCCGC ACCTATGACG TCGCCGGCAT GCGCGACGCG
CTGAAAGAAG CGCTCACCAC GTCGAAGAAG GGCCCCAAGG TGCTGATCGC GCAGTCGGAA
TGCATGCTCA ACAAGCAGCG CCGCGAGAAG CCGCTGGTGC GCAAGGCCAT CGCCGACGGC
AGGCGCATGG TGCGCGAGAA GTTCGGCGTC GATTCCGACA CCTGCACCGG CGACCATTCG
TGCATCCGCC TGTCGGGCTG CCCCTCGCTC TCGATCAAAC CCAACCCCGA TCCGCTGCGC
ACTGATCCGG TGGCCACCGT GCTCGACAGC TGCGTGGGCT GCGGCGTGTG CGGCGAGGTC
TCGCATGCGG CGGTGCTGTG CCCCTCCTTC TACAAGGCGC AGATCGTGAG CAACCCGAGC
CGCTGGGACC TGCTGCGCGA GCGCCTGCGC GCCGCCATCA TCGGCTGGCT GCAGCGCGGC
GAAGCGCGCC GCCGCGAAAC CTATGCCTTC TGA
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| Protein sequence | MAERSFVEEV KKLRLSGGDV FRGEGILAVT KALLESGVSY VAGYQGAPIS HLMDVLADAQ
DILAEQGIRF ENSASEATAA ATLAASVNYP LRGAVTFKAT VGTNVASDAL ANLASGGVTG
GALIIVGEDY GEGSSIMQER SHAFAMKSQI WLLDPRPNLP SIVDAVKQGF DLSEASNTPV
MLQLRIRACH VHGHFIAGDN KRAKFTLKDA LENPQRDVGR IVLPPASFVH EQEKVRDRWP
AAVRFIEERQ LNEFFSEDAD DIGIIVQGGS YNTLLRALER LGLADVYGNT QVPLYVMNVA
YPVIESEVIR FCEGKRAVLI VEEGQPNFVE QNLATILRQA GSATALHGKD MLPVAGEYTA
SELLKGARSF CERYGRLAPL PVPAPVRKVI PLKEVAAIGV DAAPEPAQPS TALAEVVHAR
PPGFCTGCPE RPIFSAMKLV ERELGPHHVS ADIGCHLFSI LPPFNIGNTT MGYGLGGAGA
AALNAPAGKR AISMMGDGGF WHNGLTSGVA NAVFNKSDNL TIVVDNNYTS ATGGQDILSS
NAVNKTRSTG HEIERAVRGV GVEWVKTLRR TYDVAGMRDA LKEALTTSKK GPKVLIAQSE
CMLNKQRREK PLVRKAIADG RRMVREKFGV DSDTCTGDHS CIRLSGCPSL SIKPNPDPLR
TDPVATVLDS CVGCGVCGEV SHAAVLCPSF YKAQIVSNPS RWDLLRERLR AAIIGWLQRG
EARRRETYAF
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