| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1487 |
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| Symbol | |
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| ID | 7973085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1607827 |
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| End bp | 1608630 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792085 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002943404 |
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| Protein GI | 239814494 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.672056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC GCCGCGCCTT TGCCGACCTG TCGGTGGGGC AGGTGCACTA CGCGGAATGC
GGCGATGCGA ACGCGCCGGC CGTGCTGCTG CTGCACCAGT CGCCGCGCAG CTGGGCCGAA
TACCGCGAGG TGCTGCCGCT GCTCGGCGCG CGGCATCGCG CCGTTGCCAT GGACACCGCG
GGTTTCGGCG ATTCGGCGGA CGGCGGCATG CCCGCGAGCA TCGCGCAGTG GGCGCGCGTG
GCCAGCGAAC TGCTCGACGC ACTGGGCATT GCGCAGGCCG ACGTGGTGGG GCACCACACG
GGCGGCGTCA TCGCGGTCGA ACTGGCGGCG GCGTTTCCGG GCCGCGTGCG CAGCCTCGTG
CTGTCGTCCA CGCCATACAC CGGCGAAGCC TTTCGCATCG CAAGGGCCGA GCGGCCGCCC
ATCGACGAAG TGGCGCCCAG TGAAGACGGC AGCCACCTGG CGGCACTCTG GCAGCGGCGC
CAGGGCTTCT ATCCCGAAGG GCGGCCCGAT CTGCTCGAGG CCTTCGTGCG CGATGCATTG
AAGGTCGGCC ATCGCGTGGA GGAGGGCCAT CGGGCCGTCG CCTCCTACCG CATGGAAGAG
CGCATCGGCC GCGTGACGCA GCCCGCGCTG ATCATCCGCG CCACCGCCGA TCCCTTTGCC
GCGCCGCATG CAGAGGAGCT GCTGCACCAC CTGCCGCAGG CCCGCATCGT CGACATCGAA
GGCGGCATGG TCCCCTTGCC CGACCAGATG CCCGAAGCCT TCGCGCAGGC GGTGCTCGGT
TTTCTTTCGG CGCTGCCCTC ATGA
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| Protein sequence | MTIRRAFADL SVGQVHYAEC GDANAPAVLL LHQSPRSWAE YREVLPLLGA RHRAVAMDTA
GFGDSADGGM PASIAQWARV ASELLDALGI AQADVVGHHT GGVIAVELAA AFPGRVRSLV
LSSTPYTGEA FRIARAERPP IDEVAPSEDG SHLAALWQRR QGFYPEGRPD LLEAFVRDAL
KVGHRVEEGH RAVASYRMEE RIGRVTQPAL IIRATADPFA APHAEELLHH LPQARIVDIE
GGMVPLPDQM PEAFAQAVLG FLSALPS
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