Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1482 |
Symbol | |
ID | 7973080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1601468 |
End bp | 1602733 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792080 |
Product | Ste24 endopeptidase |
Protein accession | YP_002943399 |
Protein GI | 239814489 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0238191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTATT CGCTCATCTT CACCACTGCC TTCGCCGTTG CACTGGTCGC GGGCCTGCTC GTGAAGTTCT GGCTCGCCTC GCGGCAGGTG CGCCACGTGG CGCGGCACCG CGGCGCGGTG CCGGCAGCTT TCGAACACAC CATCAGCCTT GCCGCCCACC AGAAGGCGGC CGACTACACC ATTGCCAAGG CGCGCTTCGG CCTCGTCGAA ATGGCCTGGA GCACTGCGCT GCTGCTGGGC TGGACGCTGC TGGGCGGGCT CGACGCGCTC AACCGGCTGC TGCTGGCCTG GCTCGGCGGC GGCATGGTGC AGCAGCTGGC GCTGCTGGCG GCCTTTGCGG CCATTGGCGG CCTGCTCGAG CTGCCCTTCA CGCTCTGGCA GACCTTCAGG CTCGAGGAGC GCTTCGGCTT CAACAAGATG ACCTTGCGCC TCTGGCTGGC CGACACGCTC AAGTCGACGG CGCTCGGCGC CGCGATCGGC CTGCCGATTG CGGCGCTGAT CCTGTGGCTC ATGGGCGCGG CCGGCGCCAC CTGGTGGCTC TGGGCCTGGG CCGTGTGGAT GGGGTTCAAC CTGCTGGGGA TGCTGGTGTA CCCCACCTTC ATTGCGCCGC TGTTCAACAA GTTCAAGCCG CTCGACGATC CCACGCTCAA GGAACGCGTC ACGGCGCTGA TGAAGCGCTG CGGCTTTGCC GCCAAGGGCC TGTTCGTGAT GGACGGCAGC ACCCGCAGCG CGCATGCCAA TGCCTACTTC ACCGGCTTTG GCGCGAGCAA GCGCGTGGTG TTCTACGACA CGCTGCTGCG CCAGCTCGAC GCGGCCGAAG TCGAGGCCGT GCTCGCGCAC GAGCTCGGCC ACTTCAAGCA CCGCCACATC GTGAAGCGGC TCGTCGCGAT GTTCGCGCTG AGCCTGGCGG GCTTCGCACT GCTGGGCTGG GTGTCGACCC AGGCCTGGTT CTACACGGGG CTCGGCGTGC AGCCCAACAT GGCGGCAACG GCGCCCAACG ATGCACTCGC GCTGCTGCTC TTCATGCTCG CGGTGCCGGT GTTCGGCTTC TTCGTCGCGC CGCTGCCCGC ACGCCTGTCG CGCAAGCACG AGTTCGAGGC CGATGCCTAT GCGGTGGCGC AAACCAGCGG CGCCGACCTG TCGGCCGCCC TGCTCAAGCT CTACCAGGAC AACGCGTCGA CGCTCACGCC CGACCCGGTG TTCGTCAAGT TCTACTATTC CCACCCCCCG GCCTCCGAGC GCCTTGCGCG CATGACGGCG GCCTGA
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Protein sequence | MSYSLIFTTA FAVALVAGLL VKFWLASRQV RHVARHRGAV PAAFEHTISL AAHQKAADYT IAKARFGLVE MAWSTALLLG WTLLGGLDAL NRLLLAWLGG GMVQQLALLA AFAAIGGLLE LPFTLWQTFR LEERFGFNKM TLRLWLADTL KSTALGAAIG LPIAALILWL MGAAGATWWL WAWAVWMGFN LLGMLVYPTF IAPLFNKFKP LDDPTLKERV TALMKRCGFA AKGLFVMDGS TRSAHANAYF TGFGASKRVV FYDTLLRQLD AAEVEAVLAH ELGHFKHRHI VKRLVAMFAL SLAGFALLGW VSTQAWFYTG LGVQPNMAAT APNDALALLL FMLAVPVFGF FVAPLPARLS RKHEFEADAY AVAQTSGADL SAALLKLYQD NASTLTPDPV FVKFYYSHPP ASERLARMTA A
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