| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1480 |
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| Symbol | |
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| ID | 7973078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1600120 |
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| End bp | 1601076 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792078 |
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| Product | ribosome small subunit-dependent GTPase A |
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| Protein accession | YP_002943397 |
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| Protein GI | 239814487 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.137644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTAAGC CGGGCCGCAC TCCCGCCAAG GGGGCCGGCA CCTCCGCGCG CATTCTTCAC
GACGGCCTGG TCATCGCGAG CCACGGCCGC CATTGCCTGG TCGAAACGCC AACGGGCGAG
CGCCTGATCT GCCATCCGCG CGGCAAGAAG AGCCAGGCCG TGGTCGGCGA CCGCGTGCGC
TGGCAGGCCA GCGAAGACGA AGGCACCATC GAAGAAGTCG TGCCGCGGCG CAACCTCTTC
TACCGCCAGG ACGAGATCCG CACCAAGTCG TTCGCGGCCA ATCTCGACCA CGTGCTGATC
CTGATCGCGG CCGAGCCGGA GTTCTCGGAG CATCAGCTCG CGCGCGCGCT CATTGCCGCC
GAAGCCGAAC GCATCACGCC GATCATCGCG CTCAACAAGA GCGATCTGGC CGAGCCCTTC
GAGCGCGCAT GGAACAAGCT CGCGCCCTAC CGGCGCATGC ACCATGGCGT GCTGCCGCTC
TCGCTCAAGG CGTCGGGCGA AGCCGACTAC GCATCGCTCA TGAAGCTGCT GGCTGGCAAG
AGCACGCTGG TGCTGGGCCC CTCGGGCGCC GGCAAGAGCA CGCTCATCAA CCTGCTGGTG
CCCGGTGCCA CCGCATTGAC CGGCGAGATC TCGCAGGCGC TGAATTCGGG CAAGCACACC
ACCACCAGCA CCACCTGGTA TTGGGTGGAC GAGGCGCGCA CCACCAGCCT GATCGATTCG
CCGGGCTTCC AGGAATTCGG CCTCAACCAC ATCGCGCCGA TGCAGCTCGC GGGCCTGATG
CCCGACATTG CCGAGCATGC GAACGACTGC AAGTTCTACA ACTGCACCCA TCTGCACGAA
CCGGGCTGCG GCGTGATCGC GAACGTGGAT GCGCCCGGCA AGCCAGGGCC GATCAGCGCC
ACGCGCTACA GGATCTACGG CGAACTCTTC GCCGAGCTCA GCCAGTCGCG CTACTGA
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| Protein sequence | MAKPGRTPAK GAGTSARILH DGLVIASHGR HCLVETPTGE RLICHPRGKK SQAVVGDRVR
WQASEDEGTI EEVVPRRNLF YRQDEIRTKS FAANLDHVLI LIAAEPEFSE HQLARALIAA
EAERITPIIA LNKSDLAEPF ERAWNKLAPY RRMHHGVLPL SLKASGEADY ASLMKLLAGK
STLVLGPSGA GKSTLINLLV PGATALTGEI SQALNSGKHT TTSTTWYWVD EARTTSLIDS
PGFQEFGLNH IAPMQLAGLM PDIAEHANDC KFYNCTHLHE PGCGVIANVD APGKPGPISA
TRYRIYGELF AELSQSRY
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