| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1477 |
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| Symbol | |
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| ID | 7973075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1597255 |
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| End bp | 1597974 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792075 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_002943394 |
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| Protein GI | 239814484 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.867637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTCG CGCCCGTCGA ACCCGTCAAC GCCGTGGTGC CGCCCACGCT GCTGCCGTTC
GATCCGCGCG AGGCGCCTGT GGTCGGCGGC CCCGACGGCC TGCCCGCGGT GGCGCCCGCG
CAATTGACCA CCGAGGCTCT GCGCAGGCGA TTTGCCACGC CGCCCGAATG GACGCCCGAA
TTGCGGCGCG AGCCGCGACT GACCGACCGC GCCCCGGCGC AGGCGGCCGT GCTGGTGCCC
ATCGTGCAGC GCCCGCAAGG CGCCACCGTG CTGCTGACCG AGCGCACGGC GCACCTGTCC
AACCACTCGG GACAGGTGGC GTTCCCAGGC GGGCGCGTCG ACCCCGAGGA CGCCAACATC
GCGGCGGCCG CACTGCGCGA GGCCTGGGAA GAAGTGGGGC TCTCGGCCCA GTACATCGAA
GTGCTTGGAA GCCTTCCGAC CTACACCACC GTCACCTCGT TCATCGTGAC GCCGGTGGTC
GCGCTGGTGA AGCCGGAGTT CGAACTCACC ATCAATCCCT ACGAAGTGGC GCTGGCCTTC
GAGGTGCCGC TGGCCTGGCT CATGGACCCG GCCAACCACC GCCGCCACAC GGTGCCCGCG
CCCGACGGCA CCCGCCGCGA GTGGTATTCG ATGCCCTACC AGGACGGCAG CGAAGAGCGC
TTCGTCTGGG GTGCCACCGC GGGCATGCTG CGCAATCTCT ATCGCTTCCT CAGCGCCTGA
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| Protein sequence | MQLAPVEPVN AVVPPTLLPF DPREAPVVGG PDGLPAVAPA QLTTEALRRR FATPPEWTPE
LRREPRLTDR APAQAAVLVP IVQRPQGATV LLTERTAHLS NHSGQVAFPG GRVDPEDANI
AAAALREAWE EVGLSAQYIE VLGSLPTYTT VTSFIVTPVV ALVKPEFELT INPYEVALAF
EVPLAWLMDP ANHRRHTVPA PDGTRREWYS MPYQDGSEER FVWGATAGML RNLYRFLSA
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