Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1468 |
Symbol | |
ID | 7973066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1591602 |
End bp | 1592060 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644792066 |
Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
Protein accession | YP_002943385 |
Protein GI | 239814475 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGGCCT TCGTCGCCAT CGGCGCCAAT CTCGGCGACG CCCGGGCCGC CGTGACGGCG GCCATGGACG CCATCGGCAC CATCGAGCGC ACCGTGGTGA CGGCGCGCTC GTCGCTCTAC CGCAGCGCGC CGGTCGATGC GGCCGGGCCC GATTTCATCA ACGCCGTGGT GGCCGTGCGG ACCGGGCTCA CGGCCGAGGC CTTCCTGGCC GAGCTGCACC TGCTCGAGGA GCAGGCCGGC CGCGAGCGGC CTTTTCCCAA TGCGCCGCGC ACGCTCGACC TCGACCTGCT GATGCACGGC AACGCGATCA AGGACACGCC CGCGCTGGCC TTGCCCCACC CGCGCATGCG CGACCGCGCC TTCGTGCTGA AGCCGCTTGC CGAGATCGCG CCCGACAAGG TGCCGCGCGC GGCGCTTGCC CGCGTTTCCT CGCAGGTCAT CGAGCGGATT CGCGACTGA
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Protein sequence | MQAFVAIGAN LGDARAAVTA AMDAIGTIER TVVTARSSLY RSAPVDAAGP DFINAVVAVR TGLTAEAFLA ELHLLEEQAG RERPFPNAPR TLDLDLLMHG NAIKDTPALA LPHPRMRDRA FVLKPLAEIA PDKVPRAALA RVSSQVIERI RD
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