Gene Vapar_1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1468 
Symbol 
ID7973066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1591602 
End bp1592060 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content72% 
IMG OID644792066 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_002943385 
Protein GI239814475 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGCCT TCGTCGCCAT CGGCGCCAAT CTCGGCGACG CCCGGGCCGC CGTGACGGCG 
GCCATGGACG CCATCGGCAC CATCGAGCGC ACCGTGGTGA CGGCGCGCTC GTCGCTCTAC
CGCAGCGCGC CGGTCGATGC GGCCGGGCCC GATTTCATCA ACGCCGTGGT GGCCGTGCGG
ACCGGGCTCA CGGCCGAGGC CTTCCTGGCC GAGCTGCACC TGCTCGAGGA GCAGGCCGGC
CGCGAGCGGC CTTTTCCCAA TGCGCCGCGC ACGCTCGACC TCGACCTGCT GATGCACGGC
AACGCGATCA AGGACACGCC CGCGCTGGCC TTGCCCCACC CGCGCATGCG CGACCGCGCC
TTCGTGCTGA AGCCGCTTGC CGAGATCGCG CCCGACAAGG TGCCGCGCGC GGCGCTTGCC
CGCGTTTCCT CGCAGGTCAT CGAGCGGATT CGCGACTGA
 
Protein sequence
MQAFVAIGAN LGDARAAVTA AMDAIGTIER TVVTARSSLY RSAPVDAAGP DFINAVVAVR 
TGLTAEAFLA ELHLLEEQAG RERPFPNAPR TLDLDLLMHG NAIKDTPALA LPHPRMRDRA
FVLKPLAEIA PDKVPRAALA RVSSQVIERI RD