| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1466 |
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| Symbol | |
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| ID | 7973064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1589052 |
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| End bp | 1589753 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792064 |
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| Product | DnaA regulatory inactivator Hda |
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| Protein accession | YP_002943383 |
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| Protein GI | 239814473 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTTC CCGGGATGAA ACAGCTCGCG CTCGATATCG GCATTGCGAC GGGCCCCAGC
TTCGACGCTT TTTTTGCCGG CCCGAACGAG GCGGCGCTGC GGCACCTGCA ACTGTGGGTG
GGCGGCGCCG GCAGCGCCGT GCCCCACTCT CCCGTGCCCA CCTATCTTTG GGGCGAAGGC
GGCAGCGGCA AGACCCATCT GCTCGAATCG GTGCGTGTGG CGCTGCGCGA GCAGGGCGCG
AGCGTGGGCT GGCTGCATGC CGGCGTGCTG GAGCCGCCCG AATTCGACGA GCGCTGGGGT
GCCGTGCTGC TCGACGACGT GCACCTCTAC ACCGCCGTGC AGCAGCACGC GGCCTTCAAC
TGGTTCGTCA ACGCGCAGAC GCTGCAGCGC GGCGTGGTGG CCGCGGGCGC GCTGCCGCCG
GCCGACCTGC CGCTGCGCGA GGACCTTCGC ACCCGGCTGG GCTGGGGCCA TGTGTTCCAC
CTGCAGGTGC TGAGCGAAAG CGAACGCCGC GCGGTGCTGC GCCAGGCCGC CGACACGCGC
GGCGTCATGC TGTCGGACGA GGTGCTCGAC TACATGCTGC ACCGCTTCAG CCGCGACCTG
GGCAGCCTGA TGGAGCTGCT CACGCAGCTC GACGGCTATG CCCTTCAGAC ACAGCGCGCG
ATCACGATCC CGCTGATCCG ATCCATGCTC GAAAACGAAT AG
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| Protein sequence | MNLPGMKQLA LDIGIATGPS FDAFFAGPNE AALRHLQLWV GGAGSAVPHS PVPTYLWGEG
GSGKTHLLES VRVALREQGA SVGWLHAGVL EPPEFDERWG AVLLDDVHLY TAVQQHAAFN
WFVNAQTLQR GVVAAGALPP ADLPLREDLR TRLGWGHVFH LQVLSESERR AVLRQAADTR
GVMLSDEVLD YMLHRFSRDL GSLMELLTQL DGYALQTQRA ITIPLIRSML ENE
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