| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1463 |
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| Symbol | |
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| ID | 7971291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1586107 |
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| End bp | 1586691 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792061 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_002943380 |
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| Protein GI | 239814470 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0454164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCT GTCTGATTGT GATCGACGCG CAGGAATCGT TTCGCCAGCG CGCGTACTGG
TCCGAACACG TCGCGCAGCC CTATTTCGCC GCCCAGAACG CGCTGATCGA GGGCTGCCTG
GCCGCCGGCC TTCCGGTCGT GCGCGTCTTC CACGTCGATG GTCCCGCCAC TGCGAGCCAT
CCCTTCGCGG TCGAGTCGGG CTTCGTGCGG CCGATCGAAG GCCTGGCGGC TTTCGAGGCG
GCGGCCAGCT TCACCAAGCA CCGCCACAGC GCGCTGGTCA ACAGCGGGCT CGACATCTGG
CTCACGCAGC AGGGCATCGG CCGGCTGATC GTGAGCGGCA TCCGCACCGA GCAATGCTGC
GAAACCACCG CGCGCCACGC CTCGGACCTG GGCTGGGAGG TCGACTACGT GACCGAGGCC
ACGCTGACCT TCGACATGCC GCAGCCCGAC GGCCAGCCGC TTGCCGCGGC CGACATCAAG
GCGCGCACGG CGGCCATGTT GGACGGCCGG TTCGCCACCG TCTGCAGCGT GGCGCAGGCG
CTGCAACGCG CCGGCACCGA GACCGGCGAA AGCGTGGCCG CATGA
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| Protein sequence | MKSCLIVIDA QESFRQRAYW SEHVAQPYFA AQNALIEGCL AAGLPVVRVF HVDGPATASH
PFAVESGFVR PIEGLAAFEA AASFTKHRHS ALVNSGLDIW LTQQGIGRLI VSGIRTEQCC
ETTARHASDL GWEVDYVTEA TLTFDMPQPD GQPLAAADIK ARTAAMLDGR FATVCSVAQA
LQRAGTETGE SVAA
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