| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1455 |
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| Symbol | |
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| ID | 7971283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1579253 |
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| End bp | 1580806 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792053 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_002943372 |
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| Protein GI | 239814462 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCCTGT TCAAATCCGC TTCCACCGTA TCCCTGCTGA CGCTCGCTTC GCGGATCACG
GGCCTCGTGC GCGACGTGCT TTTTGCCTCG GTGTTCGGCG TCAGCGCGCT GACCGACGCG
TTCAACGTCG CTTTCCGCAT TCCCAACCTG TTCCGGCGGG TTTTCGGCGA AGGCGCCTTC
AGCCAGGCCT TCGTGCCGGT GCTCGCGGCG CGCAAGACCG AGGCCGGCCA GGAGGGCGCC
AAGGCGCTGA TCGACCACGT CGCCACGCTG CTGACCTGGG CGCTGGTGGT GGTTTGCGTG
GCCGGCGTGG CTGGCGCGCC GCTGCTGGTG TGGGCCATGG CCAGCGGGCT GGCGGGCTTC
GACGCGGCCG TGGTCATGAC GCGCTGGATG TTTCCCTACA TCGGCTTCAT GTCGCTGGTG
GCGCTGGCGG GCGGCATCCT GAACACCTGG CGCAAGTTCG CCGTGCCGGC CGCCTCGCCG
GTGCTGCTCA ACATTGCGCT GATCCTGGCG ATCGTGGTCG GCGCGCCGCT GTTCCGCCGC
TACGGCATCG AGCCGATCTA TGCCCAGTGC GTGGGCGTGC TGGTCGGCGG CGTGCTGCAG
CTGGCCATCC AGGTTCCGGC GCTGCGTGCG CTGGGCCTCA TGCCGCGCAT CGGCGCGAGT
TTCAAGGCGC TGGGCGACGC CTGGCGCGAT CCCGCCACGC GCCAGGTGCT GAAGCTGATG
CTGCCCGCCC TGCTGGGCGT GAGCGTGGCG CAGATCTCGC TGCTCATCAA TACGCAGATC
GCCTCGCACC TTGCAGTCGG CAGCGTGACC TGGATCGGCA ATGCCGACCG CCTGATGGAA
TTCCCGACCG CGATGCTCGG CGTGGCGCTC GGCGTGGTGC TGATGCCGCA GCTGGCCGGC
GCCCGCGCGG CCAAGGACGA CGCGCGCTAC TCGTCGCTGC TCGACCTGGG CCTGCGGCTG
GTGGTGCTGC TGTCGGCGCC GTGCGCCGTC GCGCTGCTGC TCTTTGCGAA GCCGCTGGTG
GCCGTGCTGT TCCACAACGG CGCCTACCAG GGCGAGGACG TGCAGCGCAC CACCGTGGCG
CTGATGGGTT ACGGCGTCGG GCTGATCGGG CTGGTGGCCA TCAAGGTGCT CGCGCCCGGC
TACTACGCCA GGCAGGACAC GCGCACGCCC ATGCTGATCG CCGTGGGCGT GCTGGTGCTG
ACCCAGGTCC TCAATGTCTT CCTGGTGCCG GTGCTGCAGC ATGCGGCACT CACGCTGACG
ATTGCCATCG GCGCGCTGGT CAATGCGATC TGGCTGCTGG TCGGCCTGAT CCGCCGCGGC
AGCTACAAGC CCGAACCCGG CTGGGGCAAG TTCGCGCTGC AGGTGCTGGC GGGCATGCTG
GTGCTGGCGG CCCTGCTGGC CTGGGGTTCG CGCCACTTCG ACTGGATCGG CCTGCGCGAG
CAGCGCTTGC TGCGCATCGG CCTGCTGGCC GCGCTGATCG CCGGCGCGGC GCTGCTGTAT
TTCGCGGTGC TCACGGCGGT GGGCGTGCGG CTTCGCAGTT TCATGCGCCG GTAA
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| Protein sequence | MSLFKSASTV SLLTLASRIT GLVRDVLFAS VFGVSALTDA FNVAFRIPNL FRRVFGEGAF
SQAFVPVLAA RKTEAGQEGA KALIDHVATL LTWALVVVCV AGVAGAPLLV WAMASGLAGF
DAAVVMTRWM FPYIGFMSLV ALAGGILNTW RKFAVPAASP VLLNIALILA IVVGAPLFRR
YGIEPIYAQC VGVLVGGVLQ LAIQVPALRA LGLMPRIGAS FKALGDAWRD PATRQVLKLM
LPALLGVSVA QISLLINTQI ASHLAVGSVT WIGNADRLME FPTAMLGVAL GVVLMPQLAG
ARAAKDDARY SSLLDLGLRL VVLLSAPCAV ALLLFAKPLV AVLFHNGAYQ GEDVQRTTVA
LMGYGVGLIG LVAIKVLAPG YYARQDTRTP MLIAVGVLVL TQVLNVFLVP VLQHAALTLT
IAIGALVNAI WLLVGLIRRG SYKPEPGWGK FALQVLAGML VLAALLAWGS RHFDWIGLRE
QRLLRIGLLA ALIAGAALLY FAVLTAVGVR LRSFMRR
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