Gene Vapar_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1442 
Symbol 
ID7971270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1567737 
End bp1568087 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content72% 
IMG OID644792040 
ProductFeoA family protein 
Protein accessionYP_002943359 
Protein GI239814449 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1918] Fe2+ transport system protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.048364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCCATT GGCGCGCCTG GAATCCGGCG CACTTTCTTA CCGTGCAAAC CAACCATTTC 
GGGGCCGCGC CGGCATCTTC CGGCCTGCGG CTCGACCAGC TTCCCGACAA CCAGTGGGCC
ACGGTGCTCG ACGTGGCCCG CCCCGAGGGC GCGGACGACC GCGAGCTCGT GCTGCGCCTG
ACCGAGATCG GCTTCGTGCC GGGCGAGGCC GTGCGCATCG TCGCCCGCGG CCTGCCGGGG
CGCGAGCCGC TGGCGGTGCG GCTGGGCCAC ACCACCTTCG CACTGCGGCG CCATGAGGCC
GCATTGATCC ACGTGGCACC CGGCGTGCCG GAGGGCGCAA GCCATGGTTG A
 
Protein sequence
MLHWRAWNPA HFLTVQTNHF GAAPASSGLR LDQLPDNQWA TVLDVARPEG ADDRELVLRL 
TEIGFVPGEA VRIVARGLPG REPLAVRLGH TTFALRRHEA ALIHVAPGVP EGASHG