| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1425 |
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| Symbol | gltA |
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| ID | 7971253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1548164 |
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| End bp | 1549474 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792023 |
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| Product | type II citrate synthase |
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| Protein accession | YP_002943342 |
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| Protein GI | 239814432 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTT CCGATACCAA GGCCACGCTG TCGTTCAGCA ACGGCGGGGA CAGCGTCGAA
CTGCCGATCT ACAAGGGCAC CGTCGGCCCC GACGTGATCG ACATCCGCAA GCTGTATGCG
CAGACCGGCA TGTTCACCTA TGACCCGGGC TTCATGTCGA CCGCCGCCTG CCAGTCGGCC
ATCACGTACA TCGACGGCGA CAAGGGCGAG CTGCTGTACC GCGGCTACCC CATCGAGCAG
CTCGCCACCA ACTGCGACTT CCTCGAGACC TGCCACCTGC TGCTCTACGG CGAGCTGCCG
GACCAGGCCA AGAAGACCAA CTTCACCAAG CTCGTGACCA ACCACACGAT GGTCAACGAG
CAGATGCAGT TCTTCCTGCG GGGCTTCCGC CGCGACGCGC ATCCGATGGC CATCATGACC
GGCCTGGTGG GCGCGCTGTC GGCCTTCTAT CACGACAGCA CGGACATCAA CAATCCCGAG
CACCGCGAGA TCGCCGCGAT CCGCCTGATC GCGAAGATGC CCACGCTCGT GGCCATGGCC
TACAAGTACA CCGTGGGCCA GCCCTACATG TACCCGAAGA ACGAACTCAG CTATGCGGGC
AACTTCCTGC ACATGATGTT CGCCACGCCG TGCGAGGAGT ACAAGGTGAA CCCGGTGCTC
GAGCGCGCGC TCGACCGCAT CTTCATCCTG CACGCGGACC ACGAGCAGAA CGCCTCGACC
TCGACCGTGC GCCTGTGCGG CTCGTCGGGC ACCAACCCCT TCGCGGCCAT CGCAGCCGGC
GTGGCCTGCC TCTGGGGCCC GGCCCACGGC GGCGCCAACG AAGCGGCGCT CAACATGCTC
TACGACATCC AGAAGGAAGG CGGCGTGGAG AAGATCGGCG AGTTCATCAA GAAGGTCAAG
GACAAGAACT CGAACGTCAA GCTCATGGGC TTCGGCCACC GCGTGTACAA GAACTACGAC
CCGCGCGCCA AGCTGATGCA GGAAACCTGC AACGAAGTGC TGACCGAGCT GGGCCTGGAA
CAAGACCCGC TGTTCAAGCT CGCCAAGGAA CTCGAGAAGA TCGCGCTGGA AGACGAGTAC
TTCGTGTCGC GCAAGCTCTA CCCGAACGTC GACTTCTACT CGGGCATCGT CCAGCGCGCC
ATCGGCATCC CGGTGCCGCT GTTCACCGCG ATCTTCGCGC TGGCCCGTAC CGTGGGCTGG
ATTGCCCAGC TCAACGAGAT GATCGGCGAC CCCGAGTACA AGATCGGCCG CCCGCGCCAG
CTGTTCGAAG GCTCGCCCAA GCGCGACGTG CAGCCCATCG GCAAGCGCTG A
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| Protein sequence | MKASDTKATL SFSNGGDSVE LPIYKGTVGP DVIDIRKLYA QTGMFTYDPG FMSTAACQSA
ITYIDGDKGE LLYRGYPIEQ LATNCDFLET CHLLLYGELP DQAKKTNFTK LVTNHTMVNE
QMQFFLRGFR RDAHPMAIMT GLVGALSAFY HDSTDINNPE HREIAAIRLI AKMPTLVAMA
YKYTVGQPYM YPKNELSYAG NFLHMMFATP CEEYKVNPVL ERALDRIFIL HADHEQNAST
STVRLCGSSG TNPFAAIAAG VACLWGPAHG GANEAALNML YDIQKEGGVE KIGEFIKKVK
DKNSNVKLMG FGHRVYKNYD PRAKLMQETC NEVLTELGLE QDPLFKLAKE LEKIALEDEY
FVSRKLYPNV DFYSGIVQRA IGIPVPLFTA IFALARTVGW IAQLNEMIGD PEYKIGRPRQ
LFEGSPKRDV QPIGKR
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