| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1422 |
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| Symbol | |
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| ID | 7971250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1545280 |
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| End bp | 1546701 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792020 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_002943339 |
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| Protein GI | 239814429 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGCA CGCTCTACGA CAAGATCTGG GACGAACACG TCGTCCACAC CGAGGAAGAC
GGCACCGCGA TCCTCTACAT CGACCGCCAC CTGGTGCACG AAGTCACCAG CCCGCAGGCC
TTCGAGGGCC TGCGCGAGGC CGGCCGCAAG CTGTGGCGCA TCAGCTCGGT GGTGGCCACG
GCCGACCACA ACACGCCCAC CACGGGCTGG GAGCGCGGCT ACGAAGGCAT TGCCGATCCG
ACCAGCAAGG AGCAGGTCAC CACGCTCGAC AAGAACATCG CGGAATTCGG CGCCGCCGCG
TTCTTTCCAT TCCTGAGCAA GCGCCAGGGC ATCGTGCACG TGATCGGCCC TGAATCGGGC
GCCACGCTGC CGGGCATGAC GGTGGTCTGC GGCGACTCGC ACACCTCCAC CCACGGCGCC
TTCGGTGCGC TCGCGCACGG CATCGGCACC AGCGAGGTCG AGCACGTCAT GGCCACGCAG
ACGCTGCTCG GCAAGAAGGC GAAGAACATG CTCGTGAAGG TCGAGGGCAA GCTGCCTTTC
GGCTGCACCG CCAAGGACAT CGTGCTGGCC ATCATCGGCA AGATCGGCAC GGCCGGCGGC
ACGGGCTACA CGATCGAATT CGCAGGCTCG GCCATCCGCG ACCTGAGCAT GGAAGGCCGC
ATGACGGTCT GCAACATGGC CATCGAGGCC GGTGCGCGCG CCGGCCTCGT GGCGGTCGAC
GAAAAGACCA TCGGCTACAT CAAGGGCCGG CCGCTCGCGC CCACCGGTGT GGAGTGGGAC
CAGGCCGTGG CCTACTGGCG CACGCTGCAG TCCGACCCCG ACGCCGCGTT CGACGCCGTG
GTCGAGCTCG ACGCCACGCA GATCCAGCCG CAGGTCACCT GGGGCACCTC GCCCGAGATG
GTGGTCGATA TCAACGGCCG CGTGCCCGAT CCCGACAAGG AAAAGGACGC CAGCAAGCGC
AGCGCCATCG AGCGCGCGCT GGTCTACATG GGCCTGGAGC CGAACAAGGC GATGAACGAC
ATCTTCATCG ACAAGGTGTT CATCGGCTCG TGCACCAACA GCCGCATCGA GGACATGCGC
GAAGCCGCCG CCGTGGTGAA GAAGCTCGGC CAGAAGGTGG CCAAGAACGT CAAGCTCGCG
ATGGTGGTGC CCGGCTCGGG CGTGGTGAAG GAACAGGCCG AGCGCGAAGG GCTCGATGTG
ATCTTCAAGG CCGCGGGATT CGAATGGCGC GAACCCGGCT GCTCGATGTG CCTGGCGATG
AACGCCGACC GCCTGGAGCC CGGCGAGCGC TGCGCCTCCA CCAGCAACCG CAACTTCGAG
GGCCGCCAGG GCGCCGGCGG CCGCACCCAC CTCGTGAGCC CGGCCATGGC CGCCGCCGCC
GCGGTGCACG GCCACTTCGT CGACGTGCGC ACCTTCGCCT GA
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| Protein sequence | MARTLYDKIW DEHVVHTEED GTAILYIDRH LVHEVTSPQA FEGLREAGRK LWRISSVVAT
ADHNTPTTGW ERGYEGIADP TSKEQVTTLD KNIAEFGAAA FFPFLSKRQG IVHVIGPESG
ATLPGMTVVC GDSHTSTHGA FGALAHGIGT SEVEHVMATQ TLLGKKAKNM LVKVEGKLPF
GCTAKDIVLA IIGKIGTAGG TGYTIEFAGS AIRDLSMEGR MTVCNMAIEA GARAGLVAVD
EKTIGYIKGR PLAPTGVEWD QAVAYWRTLQ SDPDAAFDAV VELDATQIQP QVTWGTSPEM
VVDINGRVPD PDKEKDASKR SAIERALVYM GLEPNKAMND IFIDKVFIGS CTNSRIEDMR
EAAAVVKKLG QKVAKNVKLA MVVPGSGVVK EQAEREGLDV IFKAAGFEWR EPGCSMCLAM
NADRLEPGER CASTSNRNFE GRQGAGGRTH LVSPAMAAAA AVHGHFVDVR TFA
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