| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1405 |
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| Symbol | |
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| ID | 7971233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1527513 |
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| End bp | 1528277 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792003 |
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| Product | pyridoxine 5'-phosphate synthase |
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| Protein accession | YP_002943322 |
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| Protein GI | 239814412 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTT CCGGCCAATC CGCTACCACC TCGCTGTCGG TCAACCTCAA CAAGGTGGCC
CTGGTGCGCA ATACGCGCCA TCTCGGCATT CCGAGCGTGC TCACCGCCGC CAAGGCCTGC
CTTGCCGCCG GAGCGCAGGG CATCACCGTG CACCCCCGGC CCGACGAGCG CCACATCCGG
CCGCACGACG TGAGCGACCT GGCCGCGCTG CTGGCCAGGG ATTGGCCCGC AATCGAGTTC
AACATCGAAG GCAACCCCTT TCACAACCTG ATGGACTTCG TGCGCACGCT GAAGCCGCAC
CAGGCCACCT TCGTGCCCGA CAGCGAAACC CAGTCGACCA GCGACCATGG CTGGAGCTTC
CCCGAAGACG CCGAGCGGCT GCGCCCGCTG ATTGCCGAAG CCAAGGCCCT GGGCGTGCGC
GTGAGCCTCT TCATGGACCC TATTCCCGAG ATGATGGCCG CGGCCAAGGC GGTGGGCGCC
GACCGCGTCG AGCTCTATAC CGAGGGCTAT GCCTCATCGC GCGGCACGCC GGACGAACAG
GCCGTGCTGG CGCGCTATGT CGAAGCCGCC CGCGCGGCGC AGGCGGCGGG CCTCGGCCTC
AATGCGGGCC ACGACCTGAG CCGCGACAAC CTCACGCCGT TCCTGCGTGC GGTGCGCGGC
GTCCAGGAGG TGTCGATCGG GCATGCCTTC ATCGCCGATG CGCTCGAACT GGGCTACGCC
GCCACCACCA AGGAATACCT GCGCTGCATC CAAGAGGCGC AGTGA
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| Protein sequence | MSTSGQSATT SLSVNLNKVA LVRNTRHLGI PSVLTAAKAC LAAGAQGITV HPRPDERHIR
PHDVSDLAAL LARDWPAIEF NIEGNPFHNL MDFVRTLKPH QATFVPDSET QSTSDHGWSF
PEDAERLRPL IAEAKALGVR VSLFMDPIPE MMAAAKAVGA DRVELYTEGY ASSRGTPDEQ
AVLARYVEAA RAAQAAGLGL NAGHDLSRDN LTPFLRAVRG VQEVSIGHAF IADALELGYA
ATTKEYLRCI QEAQ
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