| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1391 |
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| Symbol | |
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| ID | 7971219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1514386 |
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| End bp | 1515129 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791989 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_002943308 |
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| Protein GI | 239814398 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATTC CCAAATTCGA AGGGCAGGTT GCCCTGGTCA CCGGCGCGTC GCGCGGCATC
GGCGCGGCCA TCGCGCTCGA GCTCGCGCAG CGCGGCCTCA AGGTGGTCGG CACCGGCACC
ACCGAGGACA GCGCGGCCAA GATCACTTCG GCGCTCAGCG CCTTCGACGG CCGCGGGCGT
GCGCTCGACG TGAACGACGC CGTCGCGGTC GAGGCGCTGA TCGACGAGAT CGTGAAGGCC
TACGGCGCGA TCCACGTGCT GGTCAACAAC GCCGGCATCA CGCGCGACAC GCTCGCCATG
CGCATGAAGG ACGACGACTG GGACGCGGTG CTCGACACCA ATCTCAAGGC CGTCTTCCGC
CTCTCGCGCG CGGTGATCCG CCCGATGATG AAGCAGCGCT ACGGCCGCAT CATCAGCATC
ACGAGCGTGG TGGGCGCGTC CGGCAATGCC GGCCAGGCCA ACTACGCGGC AGCCAAGGCC
GGCGTGGCGG GCATGACCCG CGCACTGGCG CGCGAGCTGG GCAGCCGCAG CATCACGGTC
AACTGCGTGG CGCCGGGCTT CATCGAAACC GACATGACGG CCAGCCTGCC CGAGGCACAG
CAGCAGGCGC TGCTGCAGCA GATCCCGCTG GGCCACCTGG GCAAGCCGGC CGACATCGCG
CATGCCGTGG CCTACCTCGC GTCTCCCCAG GCGTCCTACG TGACGGGGCA GGAACTGCAC
GTCAACGGCG GCATGCACAT GTAG
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| Protein sequence | MSIPKFEGQV ALVTGASRGI GAAIALELAQ RGLKVVGTGT TEDSAAKITS ALSAFDGRGR
ALDVNDAVAV EALIDEIVKA YGAIHVLVNN AGITRDTLAM RMKDDDWDAV LDTNLKAVFR
LSRAVIRPMM KQRYGRIISI TSVVGASGNA GQANYAAAKA GVAGMTRALA RELGSRSITV
NCVAPGFIET DMTASLPEAQ QQALLQQIPL GHLGKPADIA HAVAYLASPQ ASYVTGQELH
VNGGMHM
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