Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1390 |
Symbol | |
ID | 7971218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1513406 |
End bp | 1514359 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644791988 |
Product | malonyl CoA-acyl carrier protein transacylase |
Protein accession | YP_002943307 |
Protein GI | 239814397 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCCT TTGCTTTTGT CTTCCCGGGC CAGGGCTCCC AGGCCGTCGG CATGCTCGAT GCGTGGGGCG ATCACCCGGC CGTGGCCGAA ACCCTGCGCG AAGCCTCCGA AGCGCTGGGC GAAGACATCG GCGGGCTGAT CAAGAACGGC CCGAAGGAAG AACTGGCGCT GACCACCAAC ACCCAGCCGG TGATGCTGGT GGCCGGCGTG GCCGCCTGGC GCGCCTGGCT GGCCGAAGGC GGGCCCACCC CGTCGGTGGT GGCGGGACAT TCGCTCGGTG AATATTCGGC GCTGGTTGCG TCCGGCGTGC TGACGCTCGC GCAGGCCGCG CCACTGGTGC GTTTTCGCGC CCGGGCCATG CAGCAGGCCG TGCCGGTCGG CGTCGGCGCC ATGGCGGCGG TGCTGGGCAT GGAAGCCGCC AAGGTGGTGG CGGGCTGCGC GGAAGCCACG GCGTCCTTCG GTGCAGGCAG CGCCGAAATC GTCGAGGCGG TGAATTTCAA CGATCCGATG CAGACCGTGA TCGCCGGCAG CAAGGCGGCC GTCGACAAGG CCTGCGAGCT GCTCAAGGCC AGTGGTGCCA AGCGCGCGTT GCTGCTGCCG GTCTCGGCGC CATTCCATTC AAGCCTGATG AAGCCGGCCG CCGAGGCGCT GCGCGAAAAG CTCGCCACCC TCACATTGGC GCCCCCGCAG ATTCCGGTGC TGAACAACAT CGACGTGGCG GTCGAGACCG ATCCCGCGCG CATCCGCGAC GCCCTGGTGC GCCAGGCCGC CGGCCCGGTT CGCTGGGTCG AAAGCGTGCA GGCCTTGAAA CTGCGCGGCG TAGCCTCCAT CATCGAGTGC GGGCCGGGCA AGGTGCTGGC CGGCATGGTC AAGCGCATCG CCCCCGAGCT GGAAGCCGCG TCGGTGTACG ACCCGGCAAC GCTCGCGGAC ACCCGACAAT CGCTCGCCGG CTGA
|
Protein sequence | MKSFAFVFPG QGSQAVGMLD AWGDHPAVAE TLREASEALG EDIGGLIKNG PKEELALTTN TQPVMLVAGV AAWRAWLAEG GPTPSVVAGH SLGEYSALVA SGVLTLAQAA PLVRFRARAM QQAVPVGVGA MAAVLGMEAA KVVAGCAEAT ASFGAGSAEI VEAVNFNDPM QTVIAGSKAA VDKACELLKA SGAKRALLLP VSAPFHSSLM KPAAEALREK LATLTLAPPQ IPVLNNIDVA VETDPARIRD ALVRQAAGPV RWVESVQALK LRGVASIIEC GPGKVLAGMV KRIAPELEAA SVYDPATLAD TRQSLAG
|
| |