| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1389 |
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| Symbol | |
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| ID | 7971217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1512376 |
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| End bp | 1513353 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791987 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
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| Protein accession | YP_002943306 |
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| Protein GI | 239814396 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCTT ATTCACGCAT CACCGGCACC GGCAGCTACC TGCCGCCGCG CCGGGTGACC
AATGACGACC TTGCCAAGGA ATTGGCAACG CGCGGCATCG AAACCTCGGA CCAGTGGATC
GTCGAGCGCA CCGGCATCCA CGCGCGGCAC TTCGCGGCGC CCGAGGTCAC GAGCAGCGAT
CTCGCCCTCG AGGCCGCGAG GCACGCACTC GAAGCCGCGG GCCGCAAGGC CGAAGACATC
GACCTGATCA TCGTCGCGAC CTCGACGCCG GACATGGTGT TTCCGTCGTC GGCGGCCATT
CTCCAGAACA AGCTCGGCGT GGCCGGCTGC CCGGCTTTCG ACGTCCAGGC GGTCTGCAGC
GGCTTCGTCT ATGCGCTGAC CGTGGCCGAC GCGATGATCC GCACCGGCAC CGCGCGCTGC
GCGCTGGTGG TGGGCGCCGA AGTGTTCTCG CGCATCCTCG ATTTCAACGA CCGCACCACC
TGCGTGCTGT TCGGCGACGG CGCCGGCGCC GTGGTGCTCG AGGCCAGCGA GGAGCCGGGC
ATCCTGGCGA GCGACCTGCA CGCGGACGGC AAGCACGTCG GCATCCTTTG CGTGCCGGGC
CACGTCTCCG GCGGCAACGT GCTGGGCACG CCGCTGCTGC ACATGGACGG ACAGGCCGTG
TTCAAGCTCG CGGTGCGCGT GCTCGAGGAC GCCGCGCGTG CCACGCTCGC AAAGGCGGGC
AAGACCGAGG CCGACATCGA CTGGCTCATT CCGCACCAGG CCAACATCCG CATCATGGAA
GGCACGGCCA AGAAGCTGAA GCTTCCGCGC GAAAAGCTCA TCGTCACCGT CAACGAGCAT
GGCAACACCT CGGCCGCCTC GATTCCGCTG GCGCTCGACG AGGCCGTGCG GTCCGGCAAG
GTGAAGAAGG GCGAAACCGT CATGCTGGAA GGCGTGGGCG GCGGCTTCAC CTGGGGCGCG
GTGCTATTGA ATCTGTAG
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| Protein sequence | MSSYSRITGT GSYLPPRRVT NDDLAKELAT RGIETSDQWI VERTGIHARH FAAPEVTSSD
LALEAARHAL EAAGRKAEDI DLIIVATSTP DMVFPSSAAI LQNKLGVAGC PAFDVQAVCS
GFVYALTVAD AMIRTGTARC ALVVGAEVFS RILDFNDRTT CVLFGDGAGA VVLEASEEPG
ILASDLHADG KHVGILCVPG HVSGGNVLGT PLLHMDGQAV FKLAVRVLED AARATLAKAG
KTEADIDWLI PHQANIRIME GTAKKLKLPR EKLIVTVNEH GNTSAASIPL ALDEAVRSGK
VKKGETVMLE GVGGGFTWGA VLLNL
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