| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1388 |
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| Symbol | |
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| ID | 7971216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1511336 |
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| End bp | 1512376 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791986 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsX |
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| Protein accession | YP_002943305 |
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| Protein GI | 239814395 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATTGCA TGGGAGGCGA CCATGGGCCG CGCGTCACGC TTGCGGCCTG CCGCGCGTTC
CTCGAGCGGC ACAGCGAGGC CTCGTTGCTG CTGGTCGGTG CGCCGGCTGC GCTGGCGGGC
TTTGCCGCGC ATCCGCGTGC CCGCATCGTC GCGGCCAGCG AAGTGGTGGG CATGGACGAC
CCGATCGAAA TCGCCCTGCG CAAGAAGAAG GATTCTTCGA TGCGCATCGC GATCCAGCAG
GTCAAGGATG GCGCCGCCCA GGCGGCCATC TCGGCCGGCA ACACGGGCGC CCTCATGGCC
ATTGCCCGCT ACCTGCTCAA GACGCTCGAC GGCATCGACC GCCCCGCCAT CGCGCCCCAG
CTTCCAAACG CCAAGGGCGG CGCCACCACG GTGCTCGACC TGGGTGCCAA CGTCGACTGC
GACGCGGAAG ACCTGCTCCA GTTCGCGGTG CTGGGTTCCG CGCTGGTATC GGCGCTCACG
GGCAACGAGG CCCCTTCGGT CGGCCTGCTC AACATCGGCG AAGAAGCCAT CAAGGGCAGC
GAAACAATCA AAAAGGCCAG CCAACTGCTG CGTACGGCTG CCAATTCGAA GGATCTGAAC
TTCTACGGCA ACGTCGAAGG TAACGATATT TTCAAGGGCA CGACAGATAT CGTCGTATGT
GACGGTTTTG TCGGAAATGT GGCACTGAAG GCCAGCGAAG GCGTGGCATC CATGATCGGC
GAGTTCATCC GCGTCGAATT TTCCCGGAGC ATTTTCACGA AGGCCGCGGC AATTGTTGCT
TATCCGGTTT TAAAAGCGTT TAAAAACCGG CTCGATCACC GCCGCTACAA CGGAGCGGCG
CTGCTGGGCC TGCGCGGCCT GGTTTTCAAG AGCCATGGCT CGGCTGACGA AGTGGCTTTC
GGGCATGCGC TGGATCGCGC TTATGATGCC GCTCGCAACA ACCTGCTCGA TCGCGTGCGG
GCCCGCATCG CTCACGCCGC GCCATTGCTC GCGCGGCAGG AGCCCGCGGT GCCAGCCGAC
GCGACGGCCC TTCACGTTTG A
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| Protein sequence | MDCMGGDHGP RVTLAACRAF LERHSEASLL LVGAPAALAG FAAHPRARIV AASEVVGMDD
PIEIALRKKK DSSMRIAIQQ VKDGAAQAAI SAGNTGALMA IARYLLKTLD GIDRPAIAPQ
LPNAKGGATT VLDLGANVDC DAEDLLQFAV LGSALVSALT GNEAPSVGLL NIGEEAIKGS
ETIKKASQLL RTAANSKDLN FYGNVEGNDI FKGTTDIVVC DGFVGNVALK ASEGVASMIG
EFIRVEFSRS IFTKAAAIVA YPVLKAFKNR LDHRRYNGAA LLGLRGLVFK SHGSADEVAF
GHALDRAYDA ARNNLLDRVR ARIAHAAPLL ARQEPAVPAD ATALHV
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