| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1381 |
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| Symbol | |
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| ID | 7973062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1506309 |
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| End bp | 1506680 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791979 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_002943298 |
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| Protein GI | 239814388 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG AACAGCGCAT TCCCCTGTGC AATGCCTCGG ACCTGGTCGA AGGCAGCCGG
GCCGTTCCCT TCGACGTGGT CTATGGCGGC GAAACCTGCC GGGCCTTCGC GGTGCGCTTC
GAGGGGCAGC CGCATGCCTA CCTCAACCGG TGCAGCCACG TGGCGATGGA GCTGGATTTC
CAGCCCGACC GCTTCTTCGA CGACAGCGGC CAGTGGCTGC TGTGCGCCAC CCATGGCGCG
GTCTACCGGC CGGACACCGG CGAATGCGCT GGCGGCCCGT GCCGCGGCGG GCTCGTGAAG
ATCGCCCTCA GCGAACGTGA CGGCGTGGTG CACTGGCATA CTGCCTGGAA CCTCCATCCC
CTGAGCTTTT GA
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| Protein sequence | MSEEQRIPLC NASDLVEGSR AVPFDVVYGG ETCRAFAVRF EGQPHAYLNR CSHVAMELDF
QPDRFFDDSG QWLLCATHGA VYRPDTGECA GGPCRGGLVK IALSERDGVV HWHTAWNLHP
LSF
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