Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1376 |
Symbol | |
ID | 7973057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1498247 |
End bp | 1499338 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644791974 |
Product | protein of unknown function DUF513 hemX |
Protein accession | YP_002943293 |
Protein GI | 239814383 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.557955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGCCG CGTCCCCGTC CGACGACTTC TCCCCCCCAT CTGCCGCCGC GCCGGTGCCC GCCACGCTGG CGATGGCGCA GTCGCCCGAG TCGCAGGCGG CCGCCGCAAC AATGCTCTCG CGCATCGGCT TCGGACTGCT GGCCATCGTG GCATTGGCGG CCCTGGTGAT GGCCATCTCG CTGTGGCAGA AGGTCGGCGG CATGCAGGAG CAGCTGGCGC GCCAGAGCGC CGATGCGCTG GCCCAATCGC TCGAGGCGCG CACGCTCGCC CGCCAGGCCA TCGACACGGT GCGCGAGACC GCGGCACGCG CCGCGCTCAC CGAAACCCGC GTTGCCGAGG TCGCGCTGCA GCGCTCGCAG CTCGAAGAAC TGATGCAGAG CCTCTCGCGC TCGCGCGACG AGAACCTGGT GGTCGACATC GAATCGGCCG TGCGCCTGGC CTTGCAGCAG GCGCAGGTCA CGGGCAGCGT CGAGCCCCTG CTCGCGGCCC TCAAGTCCGG CGACCTGCGC ATCGCGCGCG CCGCGCAGCC CCGGCTCGCG CCGCTGCAGC GCGCCATGCA GCGCGACGCC GACCGCCTGC GCAGCAGCGC GAGCGCCGAC AGCGGCGAGG CGCTGCAAAA ACTCGACGAG CTGATGCGCA GCGTGGACGA CCTGCCGCCG CTCAACGCCG TGGCCATGCG CGGCTCGGGG CTCAATGCCT GGCAGCCGGA ACCCATTCCC GCCGATGCCG CCTGGTGGGA GAGGGTGCTG CTGACGATAC GCGCCGAAGC GCGGTCGCTG GTGCGGGTCG GGCGCATCGA GCGGCCCGAG GCGGTGCTGC TGGCACCCGA CCAGACCTAT TTCCTGCGCG AGAACCTCAA GCTCAAGCTG CTCAATGCGC GGCTTTCGCT GCTGTCGCGG CAGGTCGATG CCGCGCGCAG CGAACTCGCC ACGGTGGCCG CATCGCTGAA CCGCTATTTC GATCCCGCAT CGCGGCGCAC GCAGGCCGCC GCCACGCAGC TGCAGCAACT GCAGGCGCTG ATGAAAACCG CCGAACCCCC GCGCATCGAC GACACGCTGT CGGCGCTGGC CACGGCCGCG GCGGGGCGCT GA
|
Protein sequence | MSAASPSDDF SPPSAAAPVP ATLAMAQSPE SQAAAATMLS RIGFGLLAIV ALAALVMAIS LWQKVGGMQE QLARQSADAL AQSLEARTLA RQAIDTVRET AARAALTETR VAEVALQRSQ LEELMQSLSR SRDENLVVDI ESAVRLALQQ AQVTGSVEPL LAALKSGDLR IARAAQPRLA PLQRAMQRDA DRLRSSASAD SGEALQKLDE LMRSVDDLPP LNAVAMRGSG LNAWQPEPIP ADAAWWERVL LTIRAEARSL VRVGRIERPE AVLLAPDQTY FLRENLKLKL LNARLSLLSR QVDAARSELA TVAASLNRYF DPASRRTQAA ATQLQQLQAL MKTAEPPRID DTLSALATAA AGR
|
| |