Gene Vapar_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1376 
Symbol 
ID7973057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1498247 
End bp1499338 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content72% 
IMG OID644791974 
Productprotein of unknown function DUF513 hemX 
Protein accessionYP_002943293 
Protein GI239814383 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2959] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.557955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCG CGTCCCCGTC CGACGACTTC TCCCCCCCAT CTGCCGCCGC GCCGGTGCCC 
GCCACGCTGG CGATGGCGCA GTCGCCCGAG TCGCAGGCGG CCGCCGCAAC AATGCTCTCG
CGCATCGGCT TCGGACTGCT GGCCATCGTG GCATTGGCGG CCCTGGTGAT GGCCATCTCG
CTGTGGCAGA AGGTCGGCGG CATGCAGGAG CAGCTGGCGC GCCAGAGCGC CGATGCGCTG
GCCCAATCGC TCGAGGCGCG CACGCTCGCC CGCCAGGCCA TCGACACGGT GCGCGAGACC
GCGGCACGCG CCGCGCTCAC CGAAACCCGC GTTGCCGAGG TCGCGCTGCA GCGCTCGCAG
CTCGAAGAAC TGATGCAGAG CCTCTCGCGC TCGCGCGACG AGAACCTGGT GGTCGACATC
GAATCGGCCG TGCGCCTGGC CTTGCAGCAG GCGCAGGTCA CGGGCAGCGT CGAGCCCCTG
CTCGCGGCCC TCAAGTCCGG CGACCTGCGC ATCGCGCGCG CCGCGCAGCC CCGGCTCGCG
CCGCTGCAGC GCGCCATGCA GCGCGACGCC GACCGCCTGC GCAGCAGCGC GAGCGCCGAC
AGCGGCGAGG CGCTGCAAAA ACTCGACGAG CTGATGCGCA GCGTGGACGA CCTGCCGCCG
CTCAACGCCG TGGCCATGCG CGGCTCGGGG CTCAATGCCT GGCAGCCGGA ACCCATTCCC
GCCGATGCCG CCTGGTGGGA GAGGGTGCTG CTGACGATAC GCGCCGAAGC GCGGTCGCTG
GTGCGGGTCG GGCGCATCGA GCGGCCCGAG GCGGTGCTGC TGGCACCCGA CCAGACCTAT
TTCCTGCGCG AGAACCTCAA GCTCAAGCTG CTCAATGCGC GGCTTTCGCT GCTGTCGCGG
CAGGTCGATG CCGCGCGCAG CGAACTCGCC ACGGTGGCCG CATCGCTGAA CCGCTATTTC
GATCCCGCAT CGCGGCGCAC GCAGGCCGCC GCCACGCAGC TGCAGCAACT GCAGGCGCTG
ATGAAAACCG CCGAACCCCC GCGCATCGAC GACACGCTGT CGGCGCTGGC CACGGCCGCG
GCGGGGCGCT GA
 
Protein sequence
MSAASPSDDF SPPSAAAPVP ATLAMAQSPE SQAAAATMLS RIGFGLLAIV ALAALVMAIS 
LWQKVGGMQE QLARQSADAL AQSLEARTLA RQAIDTVRET AARAALTETR VAEVALQRSQ
LEELMQSLSR SRDENLVVDI ESAVRLALQQ AQVTGSVEPL LAALKSGDLR IARAAQPRLA
PLQRAMQRDA DRLRSSASAD SGEALQKLDE LMRSVDDLPP LNAVAMRGSG LNAWQPEPIP
ADAAWWERVL LTIRAEARSL VRVGRIERPE AVLLAPDQTY FLRENLKLKL LNARLSLLSR
QVDAARSELA TVAASLNRYF DPASRRTQAA ATQLQQLQAL MKTAEPPRID DTLSALATAA
AGR