| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1375 |
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| Symbol | |
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| ID | 7973056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1497477 |
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| End bp | 1498250 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791973 |
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| Product | Uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_002943292 |
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| Protein GI | 239814382 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.297632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCCA AGCCCGTCAT CGTCACGCGG CCGGCGCGCG AGGCCGCGCA GTGGGCGGAC
GAATTCCGGG CCGCCGGGCT GGATGCCGAG GTGCTGCCGC TGATCGCCAT CGAGCCCGCC
ATCGACGCGG AGCCGCTGCG CGCAGCGTGG AAGCGGCTTG CGGACTATGC GGCGCTGATG
TTCGTGAGCG CCACGGCGGT CGAGCATTTC TTCCTGCATG CGGAAGAAGG GCAACGCGCA
ACCGGACCGC GCTTCTGGGC CACGGGACCG GGCACGGCGC GCGCGCTGTT GCGTGCCGGC
GTGCCGCAAG ACGCCATCGA CGCACCGCCT CCCGACGCCG CCCGCTTCGA CTCCGAGGCG
CTGTGGGAGC GCGTGAAAGG GCAGGTCGGC CAGGGCGTGC GCGTGCTGAT CGTGCGCGGC
GGCGATGCGG CCGGCCAGCC GAGCGGACGC GACTGGCTCG CGCGCGAGAT CGACGCCGCA
AAGGGGTTGC GCGACACGGT GGTCGCCTAC CGGCGCCTGC CGCCATCCTT CGACGACGCG
GCGCGTGCGC TGGCACTCGA CGGCGCCGCG GGGCGCGCGG TCTGGCTGTT CAGCAGCTCG
GAGGCCATTG CCAACCTGTG CGATGCCATG CCGGGCACCG GCTGGCATGC GGCATGCGCG
GTGGCGACCC ATGCGCGCAT CGGCGAAGCC GCGCGGGCCG CGGGATTCGG TGCGGTGCGC
GTGTGCCCGC CGCTGCGGGA AGCCCTGGTC GCGTCGATAG AATCCTTCAC ATGA
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| Protein sequence | MAAKPVIVTR PAREAAQWAD EFRAAGLDAE VLPLIAIEPA IDAEPLRAAW KRLADYAALM
FVSATAVEHF FLHAEEGQRA TGPRFWATGP GTARALLRAG VPQDAIDAPP PDAARFDSEA
LWERVKGQVG QGVRVLIVRG GDAAGQPSGR DWLAREIDAA KGLRDTVVAY RRLPPSFDDA
ARALALDGAA GRAVWLFSSS EAIANLCDAM PGTGWHAACA VATHARIGEA ARAAGFGAVR
VCPPLREALV ASIESFT
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