| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1373 |
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| Symbol | |
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| ID | 7973054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1493607 |
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| End bp | 1496450 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791971 |
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| Product | phosphoenolpyruvate carboxylase |
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| Protein accession | YP_002943290 |
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| Protein GI | 239814380 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.333226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCA GCAAGACTCC TGCGCCGCCC AAGCGCCGGC AAGCCGAAGA CCAGCCGCTG
ATCGACGACA TCCGGCTCCT GGGCCGCATC CTCGGCGACG TGATCCGCGA ACAGGAGGGC
GAGGAAAGTT ATGCGCTGGT CGAGAAGATC CGCACGCTGT CGGTGGCTTT CCGCCGCGAT
GCCGACCAGG CGGCCGACCG CGCGCTCAAG AACCTGCTCA AGGGCCTGAG CGCGGCCGAG
ACGGTGCGCG TGATCCGCGC CTTCACCTAT TTCAGCCACC TGGCCAACCT GGCCGAAGAC
CGGCACCTGA TCCGCCGCCG CACCGAGGCC GAGCGCGCCG GCGAAAGCGC CGACGGCGAC
CTGCAGACCG CCCTTGCGCG CATCCGCAAG GCCGGCGTCA AGCCCGACGA GGTGGTGGCT
TCGCTGGCGC GCAGCTATGT GTCGCCGGTG CTCACCGCAC ACCCGACCGA AGTGCAGCGC
AAGAGCATCC TCGACGCCGA GCGCGCCATT GCGCAACTGC TCACCACGCG CGACGAGATC
AAGCTGCGCC AGAGCGCCTA CGCGGGCGCC AAGGACGCGC TCACGCCGCT CGAGTTTGCC
GAGAACGAAA CGCAGATGCG CATCCGCGTC ACGCAGATCT GGCAGACGCG GCTGCTGCGC
TTTTCCAAGC TCACCGTGGC CGACGAGATC GAGAACGCGC TGAGCTACTA CGAAGCCACC
TTCCTGCGCG AGATTCCGCG CGTCTATGCC GACCTCGAAA AGGCGCTGGG CCAGGGCGGC
GTGCTGCCTT CGGTGGCGCC GTTCCTGCGC ATGGGCCAGT GGATCGGCGG CGACCGCGAC
GGCAATCCCA ACGTGACGGC CGAAACGCTC GAATACGCGC TGCGCCGCCA GGCCGAGCTG
GCACTGCGCC ACTACCTCAC CGAAGTGCAC TATCTCGGCG GCGAGCTCTC GCTGTCCGCC
ACGCTGGTGG ACGTGTCGGT CGAGATGCAG GCGCTGGCCG CGCGCTCGCC CGACACCAGC
GAGCACCGCA AGGACGAGCC CTACCGCCGC GCGCTCACCG GCGTGTATGC GCGGCTGGCG
GCCACGCTGC GCGATCTCAC CGGCGGCGAG GCCGCGCGCC ACGCCGTGCC GCCGCAGAAC
CCCTATGCGA AGGCCGAGGA ATTCCTGGAC GACCTGCGCA CAGTGGAAGA GTCGCTCGTC
GAGAAGCACG GCAGCGTGCT GGCGGCGCCT CGCCTGCGGC CGCTGATCCG CGCGGTCGAG
GTGTTCGGCT TCCACCTGGC GACAGTCGAC CTGCGCCAGA GCTCGGACAA GCACGAGGCC
GTGATCGCCG AACTGCTGGC CACCGCGCGC ATCGAGCCGG CCTACGCCTC GCTGGCCGAG
GAAGCCAAGC AGACGCTGCT GCTCAAGCTG CTCGACGACG CGCGCCCGCT GCGCGTGCCC
GATGCCGAGT ACTCGCCGCT GGCGCAGAGC GAACTCGCGA TCTTCGCGGC CGCACGCACC
GCGCGTGCGC GCTACGGCGC GGCGGCCATC CGCCACTACA TCATCAGCCA CACCGAGACG
GTGAGCGACC TGCTCGAGGC CCTGCTGCTG CAAAAGGAAG TGGGCCTCCT GCGCGGCGCG
ATGAACGGCA AGGCCACCTG CGACCTGATC GTGGTGCCGC TGTTCGAAAC CATCGAGGAC
CTGCGCAATG CCGCGCCCAT CGTGCGCGCC TTCTATGCGC TGCCGAACAT CCAGGCGCTC
ATCGAGCGCT CGGGCGCCGA GCAGGATGTG ATGCTCGGCT ACAGCGACAG CAACAAGGAT
GGCGGCATCT TCACGAGCAA CTGGGAGCTC TACCGCGCGG GCATCGCGCT GGTGGCGTTG
TTCGACGAGC TCAACAAGAA GAAGGCCAAC CCGATTCGCC TGCGCATGTT CCATGGCCGC
GGCGGCACGG TGGGCCGCGG CGGCGGCCCG AGCTACCAGG CCATCCTCGC GCAGCCGCCC
GGCACGGTGC GCGGCCAGAT CCGCCTCACC GAACAGGGCG AGGTGATCGG CTCGAAGTAC
GCCAACCGCG AGATCGGCCG GCGCAACCTC GAGACGCTGG TGGCCGCCAC GCTCGAAGCC
ACGCTGCTGC CGCAGGCCAA GTCGGCGCCC GCCACATTCC TTTCAGCGGC CGGAGAGCTG
TCGACCGCGA GCATGTCGGC CTACCGCAAG CTGGTCTATG AAACCCCGGG CTTCGGCGAC
TACTTCTTCG GCTCCACGCC GATCCGCGAG ATTGCCGAGC TCAACATCGG CTCGCGTCCC
GCCTCGCGCA ACCCGAGCCA CAAGATCGAC GACCTGCGCG CCGTGCCATG GAGCTTCAGC
TGGGGCCAGT GCCGACTCAC CATTCCCGGC TGGTTCGGCT TCGGCTCGGG CGTGGAGCAG
TTCCTGGCCT CGGCCGCAAC GCCGGCCGCG CGCAAGGAGC GCACTGCGCT GCTGCGCCGC
ATGTATGCGC AGTGGCCGTT CTTTCGCACG CTGCTGTCCA ACATGGACAT GGTGCTGGCC
AAGAGCGACC TCGCGCTGGC CTCGCGCTAC GCCGAGCTGG TGACCGACCG CAAGCTGCGC
CAGAAGGTGT TCTCGATGAT CGACACCGAA TGGCACCGCA CCTCCGATGC GCTCACGCTC
ATCACCGGCG CCAAGCAAAG GCTCGAAGGC AACGCGGAGA TGCAACGCTC GGTGCGCCAC
CGCTTTCCGT ACATCGATCC GCTGCATCAC CTGCAGGTCG AGCTGATGCG CCGCTACCGC
GCGGGCGAAG GCGGCGAGCG GCTGCAGCGC GGCATCCACA TCTCGATCAA CGGGGTGGCG
GCCGGCCTGC GCAACACCGG ATGA
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| Protein sequence | MKASKTPAPP KRRQAEDQPL IDDIRLLGRI LGDVIREQEG EESYALVEKI RTLSVAFRRD
ADQAADRALK NLLKGLSAAE TVRVIRAFTY FSHLANLAED RHLIRRRTEA ERAGESADGD
LQTALARIRK AGVKPDEVVA SLARSYVSPV LTAHPTEVQR KSILDAERAI AQLLTTRDEI
KLRQSAYAGA KDALTPLEFA ENETQMRIRV TQIWQTRLLR FSKLTVADEI ENALSYYEAT
FLREIPRVYA DLEKALGQGG VLPSVAPFLR MGQWIGGDRD GNPNVTAETL EYALRRQAEL
ALRHYLTEVH YLGGELSLSA TLVDVSVEMQ ALAARSPDTS EHRKDEPYRR ALTGVYARLA
ATLRDLTGGE AARHAVPPQN PYAKAEEFLD DLRTVEESLV EKHGSVLAAP RLRPLIRAVE
VFGFHLATVD LRQSSDKHEA VIAELLATAR IEPAYASLAE EAKQTLLLKL LDDARPLRVP
DAEYSPLAQS ELAIFAAART ARARYGAAAI RHYIISHTET VSDLLEALLL QKEVGLLRGA
MNGKATCDLI VVPLFETIED LRNAAPIVRA FYALPNIQAL IERSGAEQDV MLGYSDSNKD
GGIFTSNWEL YRAGIALVAL FDELNKKKAN PIRLRMFHGR GGTVGRGGGP SYQAILAQPP
GTVRGQIRLT EQGEVIGSKY ANREIGRRNL ETLVAATLEA TLLPQAKSAP ATFLSAAGEL
STASMSAYRK LVYETPGFGD YFFGSTPIRE IAELNIGSRP ASRNPSHKID DLRAVPWSFS
WGQCRLTIPG WFGFGSGVEQ FLASAATPAA RKERTALLRR MYAQWPFFRT LLSNMDMVLA
KSDLALASRY AELVTDRKLR QKVFSMIDTE WHRTSDALTL ITGAKQRLEG NAEMQRSVRH
RFPYIDPLHH LQVELMRRYR AGEGGERLQR GIHISINGVA AGLRNTG
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