| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1364 |
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| Symbol | |
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| ID | 7973045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1484207 |
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| End bp | 1485469 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791962 |
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| Product | protein of unknown function UPF0118 |
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| Protein accession | YP_002943281 |
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| Protein GI | 239814371 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.108983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATG ACCACAAACC GGCCGGCGAT GCCCCGGCCG CGCAGCCGCC CCCGGAGCCG
CCGCCATCGC CGGCGGAGCC CCCGGCCGAG GTGCCGCCCG AACCCGTGCT GGAGTCCCCG
CCCGAAGCCG TGCCGCCCGA GTTGCGGCCG GAGCCCGAAC GCCTGCTGCT GCACATGCCG
GTCGACGTGC GCAGCGCCTC GCTGGTGGTG CTGGCCGTGC TGGCCAGCGT CTTCGCGCTG
CGATGGGGCC AGGCCGTCTT CATCCCGCTG ATGCTGAGCC TGCTGCTGAC CTACGCGCTG
TCGCCGCTGG TCGAGCGGCT GCACCGCCTG TGGCTGCCGC GCTGGATCGC CGCCGCGCTG
ATCCTCGTCG GCCTGTTCGG CGGCCTGGGC TGGACCGGCT ATTCGCTTTC GGGCAATGCC
ACGCAACTGG CCGAATCGCT GCCCATCGCG GCCCAGAAAC TGGGGCAGGC CATGCGCCGG
AGCAGGAGCG CCAACGCCAC GCCGCTCGAA AGCGTGCAGC AGGCGGCCGC GCAGCTTGAA
AAGGCGGCCG AGGAAAACTC CGCGCGCGTC GCGGCCCGCA AGGGCGTTGC GCGCGTGGTC
ATCGAGCGGC CGTCCTTCAA CGTGCGCGAC TACCTGCTGA GCGGCACCGT CGGCCTGCTC
GAGGCGATCG GGCAGCTCAC GCTGGTCGCC TTCCTGACCT ACTTCGCGCT GTGCTCCGGC
GACACCTTCC GGCGCAAGCT GATCAAGATC ACCGGTCCGA GTCTGCAGAA GAAGAAGGTC
ACGGTGCATG TGCTCGACGA CATCACCCGC AACATCGAGC GCTACCTGCT GGTGCAGATC
CTGATCAGCG CGCTGGTGGG CGTGACCACG GGCCTCGCCT TCTGGGCCAT CGGGGTCGAG
AGCGCCGCCG TGTGGGGAAT CATCGCGGCC GTGACCAACC TCATTCCCTA CGTCGGCTCG
GTGATCGTCA TGGTGGCCGC CGGGCTGGTG GCCTTCCTGC AGTTCAACAG CCTGGAGATG
GGCATCCTGG TGGGCGGCGT GTCGCTTGCC ATCCACACGC TGGTGGGCAA CCTGCTGATG
CCCTGGCTCA CCAGCCGCAC CAGCCGCATG AACCCGGTGG CCGTGTTCGT GGGCGTGATC
TTCTGGGGCT GGCTCTGGGG CGTGTGGGGG CTGCTGCTGG GCATTCCGAT CACCATGGTG
ATCAAGTCGA TCTGCGACCG GGTCGAAGAT TTGCAGCCGA TCGGGGAGCT GCTCGGGGAA
TAG
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| Protein sequence | MTDDHKPAGD APAAQPPPEP PPSPAEPPAE VPPEPVLESP PEAVPPELRP EPERLLLHMP
VDVRSASLVV LAVLASVFAL RWGQAVFIPL MLSLLLTYAL SPLVERLHRL WLPRWIAAAL
ILVGLFGGLG WTGYSLSGNA TQLAESLPIA AQKLGQAMRR SRSANATPLE SVQQAAAQLE
KAAEENSARV AARKGVARVV IERPSFNVRD YLLSGTVGLL EAIGQLTLVA FLTYFALCSG
DTFRRKLIKI TGPSLQKKKV TVHVLDDITR NIERYLLVQI LISALVGVTT GLAFWAIGVE
SAAVWGIIAA VTNLIPYVGS VIVMVAAGLV AFLQFNSLEM GILVGGVSLA IHTLVGNLLM
PWLTSRTSRM NPVAVFVGVI FWGWLWGVWG LLLGIPITMV IKSICDRVED LQPIGELLGE
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